Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CIITAP33076 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CIITAP33076 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.75□□□□□ -1.49
CIITAP33076 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.75□□□□□ -1.49
CIITAP33076 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CIITAP33076 MIR421-201ENST00000365696 85 ntBASIC5.75□□□□□ -1.49
CIITAP33076 ATP5HP3-201ENST00000396994 486 ntBASIC5.75□□□□□ -1.49
CIITAP33076 PEX12P1-201ENST00000400284 1048 ntBASIC5.75□□□□□ -1.49
CIITAP33076 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.75□□□□□ -1.49
CIITAP33076 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.75□□□□□ -1.49
CIITAP33076 AC007394.1-201ENST00000421941 531 ntBASIC5.75□□□□□ -1.49
CIITAP33076 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.75□□□□□ -1.49
CIITAP33076 MORF4L1P7-201ENST00000426038 703 ntBASIC5.75□□□□□ -1.49
CIITAP33076 NPM1P26-201ENST00000426339 738 ntBASIC5.75□□□□□ -1.49
CIITAP33076 RPS29P9-201ENST00000440360 171 ntBASIC5.75□□□□□ -1.49
CIITAP33076 AC092647.3-201ENST00000443044 633 ntBASIC5.75□□□□□ -1.49
CIITAP33076 RPL7AP61-201ENST00000443410 636 ntBASIC5.75□□□□□ -1.49
CIITAP33076 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.75□□□□□ -1.49
CIITAP33076 BUD31P2-201ENST00000449374 300 ntBASIC5.75□□□□□ -1.49
CIITAP33076 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.75□□□□□ -1.49
CIITAP33076 MTATP6P14-201ENST00000455189 673 ntBASIC5.75□□□□□ -1.49
CIITAP33076 AC078857.1-201ENST00000469870 667 ntBASIC5.75□□□□□ -1.49
CIITAP33076 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.75□□□□□ -1.49
CIITAP33076 AC093270.2-201ENST00000486157 792 ntBASIC5.75□□□□□ -1.49
CIITAP33076 RPL32P9-201ENST00000487963 407 ntBASIC5.75□□□□□ -1.49
CIITAP33076 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CIITAP33076 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CIITAP33076 SNORA70.11-201ENST00000515987 138 ntBASIC5.75□□□□□ -1.49
CIITAP33076 SNORA70.13-201ENST00000516116 138 ntBASIC5.75□□□□□ -1.49
CIITAP33076 AC020937.1-201ENST00000519677 1013 ntBASIC5.75□□□□□ -1.49
CIITAP33076 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.75□□□□□ -1.49
CIITAP33076 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CIITAP33076 AC079148.1-201ENST00000565944 819 ntBASIC5.75□□□□□ -1.49
CIITAP33076 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.75□□□□□ -1.49
CIITAP33076 AC007448.1-201ENST00000582714 234 ntBASIC5.75□□□□□ -1.49
CIITAP33076 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.75□□□□□ -1.49
CIITAP33076 PRPF19P1-201ENST00000584766 898 ntBASIC5.75□□□□□ -1.49
CIITAP33076 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CIITAP33076 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.75□□□□□ -1.49
CIITAP33076 KATNBL1P5-201ENST00000605015 517 ntBASIC5.75□□□□□ -1.49
CIITAP33076 AL021707.7-201ENST00000607991 416 ntBASIC5.75□□□□□ -1.49
CIITAP33076 AL050303.3-201ENST00000613704 284 ntBASIC5.75□□□□□ -1.49
CIITAP33076 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.75□□□□□ -1.49
CIITAP33076 AC091046.2-201ENST00000620775 665 ntBASIC5.75□□□□□ -1.49
CIITAP33076 AL138955.1-201ENST00000622881 1040 ntBASIC5.75□□□□□ -1.49
CIITAP33076 AC097460.3-201ENST00000623099 442 ntBASIC5.75□□□□□ -1.49
CIITAP33076 AP003499.2-201ENST00000624100 483 ntBASIC5.75□□□□□ -1.49
CIITAP33076 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.75□□□□□ -1.49
CIITAP33076 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CIITAP33076 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CIITAP33076 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CIITAP33076 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.75□□□□□ -1.49
CIITAP33076 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CIITAP33076 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CIITAP33076 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
CIITAP33076 AC007996.1-201ENST00000620414 2821 ntBASIC5.75□□□□□ -1.49
CIITAP33076 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CIITAP33076 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CIITAP33076 AC068870.3-201ENST00000625077 2536 ntBASIC5.74□□□□□ -1.49
CIITAP33076 AC010132.2-201ENST00000295493 1043 ntBASIC5.74□□□□□ -1.49
CIITAP33076 RN7SKP104-201ENST00000362605 328 ntBASIC5.74□□□□□ -1.49
CIITAP33076 RNA5SP428-201ENST00000365129 132 ntBASIC5.74□□□□□ -1.49
CIITAP33076 AC007618.1-201ENST00000366455 732 ntBASIC5.74□□□□□ -1.49
CIITAP33076 RNU6-1263P-201ENST00000384601 106 ntBASIC5.74□□□□□ -1.49
CIITAP33076 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CIITAP33076 U3.32-201ENST00000408116 212 ntBASIC5.74□□□□□ -1.49
CIITAP33076 SNORA77-201ENST00000408716 125 ntBASIC5.74□□□□□ -1.49
CIITAP33076 UBE2D3P3-201ENST00000426992 425 ntBASIC5.74□□□□□ -1.49
CIITAP33076 OR7E125P-201ENST00000443450 846 ntBASIC5.74□□□□□ -1.49
CIITAP33076 IGHV5-78-201ENST00000450948 295 ntBASIC5.74□□□□□ -1.49
CIITAP33076 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.74□□□□□ -1.49
CIITAP33076 AC108729.2-201ENST00000476543 840 ntBASIC5.74□□□□□ -1.49
CIITAP33076 RN7SL97P-201ENST00000486780 299 ntBASIC5.74□□□□□ -1.49
CIITAP33076 RN7SL244P-201ENST00000493405 297 ntBASIC5.74□□□□□ -1.49
CIITAP33076 NDUFA5P12-201ENST00000503796 343 ntBASIC5.74□□□□□ -1.49
CIITAP33076 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.74□□□□□ -1.49
CIITAP33076 AC110775.1-201ENST00000513721 462 ntBASIC5.74□□□□□ -1.49
CIITAP33076 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.74□□□□□ -1.49
CIITAP33076 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.74□□□□□ -1.49
CIITAP33076 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.74□□□□□ -1.49
CIITAP33076 VTA1P2-201ENST00000520205 911 ntBASIC5.74□□□□□ -1.49
CIITAP33076 OR5AZ1P-201ENST00000527448 943 ntBASIC5.74□□□□□ -1.49
CIITAP33076 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.74□□□□□ -1.49
CIITAP33076 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CIITAP33076 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.74□□□□□ -1.49
CIITAP33076 NMNAT1P1-201ENST00000554095 876 ntBASIC5.74□□□□□ -1.49
CIITAP33076 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.74□□□□□ -1.49
CIITAP33076 AC104072.1-201ENST00000568817 668 ntBASIC5.74□□□□□ -1.49
CIITAP33076 AC006116.7-201ENST00000590141 756 ntBASIC5.74□□□□□ -1.49
CIITAP33076 ZNF92P2-201ENST00000600543 1059 ntBASIC5.74□□□□□ -1.49
CIITAP33076 AC018695.5-201ENST00000605872 315 ntBASIC5.74□□□□□ -1.49
CIITAP33076 AC097504.2-201ENST00000608088 454 ntBASIC5.74□□□□□ -1.49
CIITAP33076 AC027449.1-201ENST00000608890 407 ntBASIC5.74□□□□□ -1.49
CIITAP33076 AC090912.3-201ENST00000609775 533 ntBASIC5.74□□□□□ -1.49
CIITAP33076 AC095038.2-201ENST00000621464 1070 ntBASIC5.74□□□□□ -1.49
CIITAP33076 AC112694.2-201ENST00000623697 768 ntBASIC5.74□□□□□ -1.49
CIITAP33076 AP003485.1-201ENST00000625093 753 ntBASIC5.74□□□□□ -1.49
CIITAP33076 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.74□□□□□ -1.49
CIITAP33076 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.74□□□□□ -1.49
CIITAP33076 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms