Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PdfS4R2K0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PdfS4R2K0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PdfS4R2K0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PdfS4R2K0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
PdfS4R2K0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PdfS4R2K0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PdfS4R2K0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
PdfS4R2K0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PdfS4R2K0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PdfS4R2K0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PdfS4R2K0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.85□□□□□ -0.35
PdfS4R2K0 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.85□□□□□ -0.35
PdfS4R2K0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.85□□□□□ -0.35
PdfS4R2K0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.85□□□□□ -0.35
PdfS4R2K0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PdfS4R2K0 Gm20760-201ENSMUST00000179197 648 ntBASIC12.85□□□□□ -0.35
PdfS4R2K0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.85□□□□□ -0.35
PdfS4R2K0 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PdfS4R2K0 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PdfS4R2K0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PdfS4R2K0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
PdfS4R2K0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PdfS4R2K0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PdfS4R2K0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PdfS4R2K0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PdfS4R2K0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdfS4R2K0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdfS4R2K0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdfS4R2K0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdfS4R2K0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdfS4R2K0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
PdfS4R2K0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdfS4R2K0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdfS4R2K0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdfS4R2K0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdfS4R2K0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdfS4R2K0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
PdfS4R2K0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdfS4R2K0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PdfS4R2K0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
PdfS4R2K0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.84□□□□□ -0.35
PdfS4R2K0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
PdfS4R2K0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.84□□□□□ -0.35
PdfS4R2K0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.84□□□□□ -0.35
PdfS4R2K0 Rab3c-203ENSMUST00000224180 967 ntBASIC12.84□□□□□ -0.35
PdfS4R2K0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdfS4R2K0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
PdfS4R2K0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
PdfS4R2K0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdfS4R2K0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdfS4R2K0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdfS4R2K0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.84□□□□□ -0.35
PdfS4R2K0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdfS4R2K0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdfS4R2K0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdfS4R2K0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdfS4R2K0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdfS4R2K0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PdfS4R2K0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
PdfS4R2K0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
PdfS4R2K0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
PdfS4R2K0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
PdfS4R2K0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PdfS4R2K0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
PdfS4R2K0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PdfS4R2K0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
PdfS4R2K0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.83□□□□□ -0.36
PdfS4R2K0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
PdfS4R2K0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC12.83□□□□□ -0.36
PdfS4R2K0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
PdfS4R2K0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PdfS4R2K0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.83□□□□□ -0.36
PdfS4R2K0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.83□□□□□ -0.36
PdfS4R2K0 Gm26524-201ENSMUST00000192339 390 ntBASIC12.83□□□□□ -0.36
PdfS4R2K0 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.83□□□□□ -0.36
PdfS4R2K0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
PdfS4R2K0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
PdfS4R2K0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PdfS4R2K0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.83□□□□□ -0.36
PdfS4R2K0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.83□□□□□ -0.36
PdfS4R2K0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
PdfS4R2K0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PdfS4R2K0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PdfS4R2K0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.83□□□□□ -0.36
PdfS4R2K0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
PdfS4R2K0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PdfS4R2K0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
PdfS4R2K0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
PdfS4R2K0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdfS4R2K0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PdfS4R2K0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdfS4R2K0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
PdfS4R2K0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdfS4R2K0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdfS4R2K0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdfS4R2K0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdfS4R2K0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdfS4R2K0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdfS4R2K0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms