Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmg20bQ9Z104 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hmg20bQ9Z104 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hmg20bQ9Z104 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmg20bQ9Z104 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Hmg20bQ9Z104 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Hmg20bQ9Z104 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.71■□□□□ 0.75
Hmg20bQ9Z104 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.71■□□□□ 0.75
Hmg20bQ9Z104 Mir6982-201ENSMUST00000184354 68 ntBASIC19.71■□□□□ 0.75
Hmg20bQ9Z104 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hmg20bQ9Z104 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmg20bQ9Z104 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmg20bQ9Z104 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmg20bQ9Z104 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmg20bQ9Z104 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmg20bQ9Z104 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hmg20bQ9Z104 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmg20bQ9Z104 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmg20bQ9Z104 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmg20bQ9Z104 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmg20bQ9Z104 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.7■□□□□ 0.74
Hmg20bQ9Z104 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmg20bQ9Z104 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmg20bQ9Z104 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Hmg20bQ9Z104 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Hmg20bQ9Z104 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmg20bQ9Z104 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmg20bQ9Z104 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmg20bQ9Z104 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.7■□□□□ 0.74
Hmg20bQ9Z104 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmg20bQ9Z104 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmg20bQ9Z104 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.7■□□□□ 0.74
Hmg20bQ9Z104 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Hmg20bQ9Z104 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmg20bQ9Z104 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hmg20bQ9Z104 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmg20bQ9Z104 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Hmg20bQ9Z104 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hmg20bQ9Z104 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Hmg20bQ9Z104 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hmg20bQ9Z104 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Hmg20bQ9Z104 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hmg20bQ9Z104 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hmg20bQ9Z104 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.69■□□□□ 0.74
Hmg20bQ9Z104 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.69■□□□□ 0.74
Hmg20bQ9Z104 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmg20bQ9Z104 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Hmg20bQ9Z104 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmg20bQ9Z104 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.69■□□□□ 0.74
Hmg20bQ9Z104 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Hmg20bQ9Z104 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmg20bQ9Z104 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Hmg20bQ9Z104 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Hmg20bQ9Z104 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Hmg20bQ9Z104 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmg20bQ9Z104 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmg20bQ9Z104 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hmg20bQ9Z104 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Hmg20bQ9Z104 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmg20bQ9Z104 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmg20bQ9Z104 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Hmg20bQ9Z104 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hmg20bQ9Z104 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hmg20bQ9Z104 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Hmg20bQ9Z104 Gm6433-201ENSMUST00000118634 875 ntBASIC19.68■□□□□ 0.74
Hmg20bQ9Z104 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.68■□□□□ 0.74
Hmg20bQ9Z104 Gm44450-201ENSMUST00000199528 114 ntBASIC19.68■□□□□ 0.74
Hmg20bQ9Z104 Gm10566-201ENSMUST00000086739 996 ntBASIC19.68■□□□□ 0.74
Hmg20bQ9Z104 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmg20bQ9Z104 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hmg20bQ9Z104 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmg20bQ9Z104 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmg20bQ9Z104 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmg20bQ9Z104 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmg20bQ9Z104 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Hmg20bQ9Z104 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Hmg20bQ9Z104 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmg20bQ9Z104 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmg20bQ9Z104 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmg20bQ9Z104 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Hmg20bQ9Z104 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.67■□□□□ 0.74
Hmg20bQ9Z104 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Hmg20bQ9Z104 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Hmg20bQ9Z104 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hmg20bQ9Z104 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.67■□□□□ 0.74
Hmg20bQ9Z104 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.67■□□□□ 0.74
Hmg20bQ9Z104 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmg20bQ9Z104 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Hmg20bQ9Z104 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmg20bQ9Z104 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmg20bQ9Z104 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmg20bQ9Z104 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmg20bQ9Z104 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmg20bQ9Z104 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.66■□□□□ 0.74
Hmg20bQ9Z104 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmg20bQ9Z104 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.66■□□□□ 0.74
Hmg20bQ9Z104 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmg20bQ9Z104 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hmg20bQ9Z104 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmg20bQ9Z104 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms