Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip2Q9Z0H8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clip2Q9Z0H8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.45■□□□□ 0.7
Clip2Q9Z0H8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Clip2Q9Z0H8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip2Q9Z0H8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.45■□□□□ 0.7
Clip2Q9Z0H8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clip2Q9Z0H8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip2Q9Z0H8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.45■□□□□ 0.7
Clip2Q9Z0H8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip2Q9Z0H8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip2Q9Z0H8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip2Q9Z0H8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clip2Q9Z0H8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clip2Q9Z0H8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clip2Q9Z0H8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clip2Q9Z0H8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip2Q9Z0H8 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.44■□□□□ 0.7
Clip2Q9Z0H8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip2Q9Z0H8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip2Q9Z0H8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Clip2Q9Z0H8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip2Q9Z0H8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clip2Q9Z0H8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip2Q9Z0H8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.44■□□□□ 0.7
Clip2Q9Z0H8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip2Q9Z0H8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip2Q9Z0H8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Clip2Q9Z0H8 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.44■□□□□ 0.7
Clip2Q9Z0H8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Clip2Q9Z0H8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Clip2Q9Z0H8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.44■□□□□ 0.7
Clip2Q9Z0H8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip2Q9Z0H8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clip2Q9Z0H8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip2Q9Z0H8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip2Q9Z0H8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip2Q9Z0H8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip2Q9Z0H8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clip2Q9Z0H8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip2Q9Z0H8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.43■□□□□ 0.7
Clip2Q9Z0H8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip2Q9Z0H8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip2Q9Z0H8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.43■□□□□ 0.7
Clip2Q9Z0H8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clip2Q9Z0H8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Clip2Q9Z0H8 Ank2-226ENSMUST00000189368 339 ntBASIC19.43■□□□□ 0.7
Clip2Q9Z0H8 Gm45328-201ENSMUST00000210942 917 ntBASIC19.43■□□□□ 0.7
Clip2Q9Z0H8 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.43■□□□□ 0.7
Clip2Q9Z0H8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Clip2Q9Z0H8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Clip2Q9Z0H8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip2Q9Z0H8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip2Q9Z0H8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip2Q9Z0H8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip2Q9Z0H8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.42■□□□□ 0.7
Clip2Q9Z0H8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.42■□□□□ 0.7
Clip2Q9Z0H8 Gm18421-201ENSMUST00000204122 625 ntBASIC19.42■□□□□ 0.7
Clip2Q9Z0H8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clip2Q9Z0H8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip2Q9Z0H8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip2Q9Z0H8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip2Q9Z0H8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Clip2Q9Z0H8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip2Q9Z0H8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip2Q9Z0H8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip2Q9Z0H8 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.41■□□□□ 0.7
Clip2Q9Z0H8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip2Q9Z0H8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Clip2Q9Z0H8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.41■□□□□ 0.7
Clip2Q9Z0H8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip2Q9Z0H8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip2Q9Z0H8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clip2Q9Z0H8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clip2Q9Z0H8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.41■□□□□ 0.7
Clip2Q9Z0H8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.41■□□□□ 0.7
Clip2Q9Z0H8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.41■□□□□ 0.7
Clip2Q9Z0H8 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.41■□□□□ 0.7
Clip2Q9Z0H8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Clip2Q9Z0H8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip2Q9Z0H8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip2Q9Z0H8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip2Q9Z0H8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clip2Q9Z0H8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip2Q9Z0H8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip2Q9Z0H8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
Clip2Q9Z0H8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip2Q9Z0H8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Clip2Q9Z0H8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clip2Q9Z0H8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clip2Q9Z0H8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clip2Q9Z0H8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clip2Q9Z0H8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Clip2Q9Z0H8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clip2Q9Z0H8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.4■□□□□ 0.7
Clip2Q9Z0H8 Gm29707-201ENSMUST00000196325 491 ntBASIC19.4■□□□□ 0.7
Clip2Q9Z0H8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clip2Q9Z0H8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.4■□□□□ 0.7
Clip2Q9Z0H8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Clip2Q9Z0H8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms