Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcb1Q9Z0H3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcb1Q9Z0H3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcb1Q9Z0H3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Smarcb1Q9Z0H3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcb1Q9Z0H3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcb1Q9Z0H3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.32■□□□□ 0.36
Smarcb1Q9Z0H3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Smarcb1Q9Z0H3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcb1Q9Z0H3 Gm15372-201ENSMUST00000120729 834 ntBASIC17.32■□□□□ 0.36
Smarcb1Q9Z0H3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcb1Q9Z0H3 Gm44430-201ENSMUST00000203376 995 ntBASIC17.32■□□□□ 0.36
Smarcb1Q9Z0H3 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.32■□□□□ 0.36
Smarcb1Q9Z0H3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcb1Q9Z0H3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcb1Q9Z0H3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcb1Q9Z0H3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Smarcb1Q9Z0H3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcb1Q9Z0H3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Smarcb1Q9Z0H3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcb1Q9Z0H3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Gm13312-201ENSMUST00000119631 718 ntBASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcb1Q9Z0H3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Smarcb1Q9Z0H3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Smarcb1Q9Z0H3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcb1Q9Z0H3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcb1Q9Z0H3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.29■□□□□ 0.36
Smarcb1Q9Z0H3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcb1Q9Z0H3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcb1Q9Z0H3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcb1Q9Z0H3 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.29■□□□□ 0.36
Smarcb1Q9Z0H3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcb1Q9Z0H3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcb1Q9Z0H3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Smarcb1Q9Z0H3 Rprl3-201ENSMUST00000157400 290 ntBASIC17.29■□□□□ 0.36
Smarcb1Q9Z0H3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcb1Q9Z0H3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcb1Q9Z0H3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcb1Q9Z0H3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcb1Q9Z0H3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcb1Q9Z0H3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcb1Q9Z0H3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms