Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn5Q9WVD4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn5Q9WVD4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn5Q9WVD4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn5Q9WVD4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn5Q9WVD4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn5Q9WVD4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn5Q9WVD4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.29■□□□□ 0.36
Clcn5Q9WVD4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn5Q9WVD4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.29■□□□□ 0.36
Clcn5Q9WVD4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn5Q9WVD4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn5Q9WVD4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn5Q9WVD4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Clcn5Q9WVD4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn5Q9WVD4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn5Q9WVD4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.28■□□□□ 0.36
Clcn5Q9WVD4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn5Q9WVD4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn5Q9WVD4 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn5Q9WVD4 Gm12895-201ENSMUST00000122214 226 ntBASIC17.28■□□□□ 0.36
Clcn5Q9WVD4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.28■□□□□ 0.36
Clcn5Q9WVD4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.28■□□□□ 0.36
Clcn5Q9WVD4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn5Q9WVD4 Gm27525-201ENSMUST00000184465 107 ntBASIC17.28■□□□□ 0.36
Clcn5Q9WVD4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.28■□□□□ 0.36
Clcn5Q9WVD4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn5Q9WVD4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn5Q9WVD4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Clcn5Q9WVD4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn5Q9WVD4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn5Q9WVD4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Clcn5Q9WVD4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clcn5Q9WVD4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Clcn5Q9WVD4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Clcn5Q9WVD4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.27■□□□□ 0.36
Clcn5Q9WVD4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Clcn5Q9WVD4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Clcn5Q9WVD4 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Clcn5Q9WVD4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.27■□□□□ 0.36
Clcn5Q9WVD4 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.27■□□□□ 0.36
Clcn5Q9WVD4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.27■□□□□ 0.36
Clcn5Q9WVD4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Clcn5Q9WVD4 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.27■□□□□ 0.35
Clcn5Q9WVD4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clcn5Q9WVD4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Clcn5Q9WVD4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clcn5Q9WVD4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clcn5Q9WVD4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn5Q9WVD4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn5Q9WVD4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn5Q9WVD4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn5Q9WVD4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.26■□□□□ 0.35
Clcn5Q9WVD4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn5Q9WVD4 Gm15794-201ENSMUST00000120182 631 ntBASIC17.26■□□□□ 0.35
Clcn5Q9WVD4 Gm11452-201ENSMUST00000122376 690 ntBASIC17.26■□□□□ 0.35
Clcn5Q9WVD4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.26■□□□□ 0.35
Clcn5Q9WVD4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn5Q9WVD4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Clcn5Q9WVD4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.26■□□□□ 0.35
Clcn5Q9WVD4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.26■□□□□ 0.35
Clcn5Q9WVD4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Clcn5Q9WVD4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn5Q9WVD4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn5Q9WVD4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
Clcn5Q9WVD4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Clcn5Q9WVD4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn5Q9WVD4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn5Q9WVD4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn5Q9WVD4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn5Q9WVD4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn5Q9WVD4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Clcn5Q9WVD4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.25■□□□□ 0.35
Clcn5Q9WVD4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.25■□□□□ 0.35
Clcn5Q9WVD4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Clcn5Q9WVD4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn5Q9WVD4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Clcn5Q9WVD4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn5Q9WVD4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn5Q9WVD4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn5Q9WVD4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Clcn5Q9WVD4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.25■□□□□ 0.35
Clcn5Q9WVD4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.25■□□□□ 0.35
Clcn5Q9WVD4 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn5Q9WVD4 Gm10052-201ENSMUST00000168019 960 ntBASIC17.25■□□□□ 0.35
Clcn5Q9WVD4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn5Q9WVD4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn5Q9WVD4 Gm7729-201ENSMUST00000050143 801 ntBASIC17.25■□□□□ 0.35
Clcn5Q9WVD4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn5Q9WVD4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn5Q9WVD4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn5Q9WVD4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn5Q9WVD4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.24■□□□□ 0.35
Clcn5Q9WVD4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn5Q9WVD4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn5Q9WVD4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn5Q9WVD4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn5Q9WVD4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn5Q9WVD4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn5Q9WVD4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms