Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CcsQ9WU84 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CcsQ9WU84 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.04□□□□□ -0.32
CcsQ9WU84 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CcsQ9WU84 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
CcsQ9WU84 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CcsQ9WU84 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CcsQ9WU84 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CcsQ9WU84 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CcsQ9WU84 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CcsQ9WU84 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CcsQ9WU84 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CcsQ9WU84 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CcsQ9WU84 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CcsQ9WU84 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CcsQ9WU84 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CcsQ9WU84 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CcsQ9WU84 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
CcsQ9WU84 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CcsQ9WU84 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CcsQ9WU84 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CcsQ9WU84 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CcsQ9WU84 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CcsQ9WU84 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CcsQ9WU84 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
CcsQ9WU84 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CcsQ9WU84 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CcsQ9WU84 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.03□□□□□ -0.32
CcsQ9WU84 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.03□□□□□ -0.32
CcsQ9WU84 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.03□□□□□ -0.32
CcsQ9WU84 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.03□□□□□ -0.32
CcsQ9WU84 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.03□□□□□ -0.32
CcsQ9WU84 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.03□□□□□ -0.32
CcsQ9WU84 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CcsQ9WU84 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
CcsQ9WU84 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.03□□□□□ -0.32
CcsQ9WU84 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CcsQ9WU84 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.03□□□□□ -0.32
CcsQ9WU84 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CcsQ9WU84 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CcsQ9WU84 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CcsQ9WU84 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CcsQ9WU84 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.03□□□□□ -0.32
CcsQ9WU84 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CcsQ9WU84 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CcsQ9WU84 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CcsQ9WU84 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CcsQ9WU84 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CcsQ9WU84 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.03□□□□□ -0.32
CcsQ9WU84 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CcsQ9WU84 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CcsQ9WU84 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CcsQ9WU84 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CcsQ9WU84 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CcsQ9WU84 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CcsQ9WU84 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CcsQ9WU84 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CcsQ9WU84 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CcsQ9WU84 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CcsQ9WU84 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CcsQ9WU84 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CcsQ9WU84 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CcsQ9WU84 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CcsQ9WU84 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CcsQ9WU84 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CcsQ9WU84 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CcsQ9WU84 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CcsQ9WU84 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CcsQ9WU84 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.02□□□□□ -0.33
CcsQ9WU84 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CcsQ9WU84 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CcsQ9WU84 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CcsQ9WU84 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
CcsQ9WU84 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CcsQ9WU84 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
CcsQ9WU84 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CcsQ9WU84 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CcsQ9WU84 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CcsQ9WU84 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CcsQ9WU84 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CcsQ9WU84 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CcsQ9WU84 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CcsQ9WU84 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CcsQ9WU84 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CcsQ9WU84 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CcsQ9WU84 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CcsQ9WU84 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CcsQ9WU84 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CcsQ9WU84 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CcsQ9WU84 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CcsQ9WU84 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CcsQ9WU84 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CcsQ9WU84 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CcsQ9WU84 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CcsQ9WU84 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CcsQ9WU84 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CcsQ9WU84 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CcsQ9WU84 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CcsQ9WU84 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CcsQ9WU84 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms