Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a4Q9QZR9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a4Q9QZR9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a4Q9QZR9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a4Q9QZR9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a4Q9QZR9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Col4a4Q9QZR9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.73■□□□□ 0.27
Col4a4Q9QZR9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.73■□□□□ 0.27
Col4a4Q9QZR9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.73■□□□□ 0.27
Col4a4Q9QZR9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a4Q9QZR9 Gm27494-201ENSMUST00000184735 189 ntBASIC16.73■□□□□ 0.27
Col4a4Q9QZR9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a4Q9QZR9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a4Q9QZR9 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.73■□□□□ 0.27
Col4a4Q9QZR9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a4Q9QZR9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a4Q9QZR9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.73■□□□□ 0.27
Col4a4Q9QZR9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a4Q9QZR9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.73■□□□□ 0.27
Col4a4Q9QZR9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a4Q9QZR9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.72■□□□□ 0.27
Col4a4Q9QZR9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.72■□□□□ 0.27
Col4a4Q9QZR9 AA543401-201ENSMUST00000164248 1269 ntBASIC16.72■□□□□ 0.27
Col4a4Q9QZR9 Gm8655-201ENSMUST00000221159 852 ntBASIC16.72■□□□□ 0.27
Col4a4Q9QZR9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a4Q9QZR9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a4Q9QZR9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a4Q9QZR9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a4Q9QZR9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.72■□□□□ 0.27
Col4a4Q9QZR9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.72■□□□□ 0.27
Col4a4Q9QZR9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a4Q9QZR9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a4Q9QZR9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Col4a4Q9QZR9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a4Q9QZR9 Gm5312-201ENSMUST00000203728 547 ntBASIC16.72■□□□□ 0.27
Col4a4Q9QZR9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Col4a4Q9QZR9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a4Q9QZR9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col4a4Q9QZR9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col4a4Q9QZR9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.71■□□□□ 0.27
Col4a4Q9QZR9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.71■□□□□ 0.27
Col4a4Q9QZR9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.71■□□□□ 0.27
Col4a4Q9QZR9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Col4a4Q9QZR9 Gm27300-201ENSMUST00000184085 97 ntBASIC16.71■□□□□ 0.27
Col4a4Q9QZR9 Gm27335-201ENSMUST00000184758 97 ntBASIC16.71■□□□□ 0.27
Col4a4Q9QZR9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col4a4Q9QZR9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col4a4Q9QZR9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Col4a4Q9QZR9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Col4a4Q9QZR9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Col4a4Q9QZR9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Col4a4Q9QZR9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Col4a4Q9QZR9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col4a4Q9QZR9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col4a4Q9QZR9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Col4a4Q9QZR9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col4a4Q9QZR9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.7■□□□□ 0.26
Col4a4Q9QZR9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col4a4Q9QZR9 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Col4a4Q9QZR9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col4a4Q9QZR9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col4a4Q9QZR9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col4a4Q9QZR9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.7■□□□□ 0.26
Col4a4Q9QZR9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col4a4Q9QZR9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
Col4a4Q9QZR9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a4Q9QZR9 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a4Q9QZR9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a4Q9QZR9 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.69■□□□□ 0.26
Col4a4Q9QZR9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a4Q9QZR9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Col4a4Q9QZR9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a4Q9QZR9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.69■□□□□ 0.26
Col4a4Q9QZR9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Col4a4Q9QZR9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a4Q9QZR9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a4Q9QZR9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a4Q9QZR9 Gm23547-201ENSMUST00000158210 271 ntBASIC16.69■□□□□ 0.26
Col4a4Q9QZR9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a4Q9QZR9 Gm17968-201ENSMUST00000194902 784 ntBASIC16.69■□□□□ 0.26
Col4a4Q9QZR9 Gm43125-201ENSMUST00000201724 730 ntBASIC16.69■□□□□ 0.26
Col4a4Q9QZR9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a4Q9QZR9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a4Q9QZR9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a4Q9QZR9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a4Q9QZR9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a4Q9QZR9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.68■□□□□ 0.26
Col4a4Q9QZR9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.68■□□□□ 0.26
Col4a4Q9QZR9 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.68■□□□□ 0.26
Col4a4Q9QZR9 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.68■□□□□ 0.26
Col4a4Q9QZR9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a4Q9QZR9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a4Q9QZR9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a4Q9QZR9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a4Q9QZR9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.67■□□□□ 0.26
Col4a4Q9QZR9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a4Q9QZR9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.67■□□□□ 0.26
Col4a4Q9QZR9 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.67■□□□□ 0.26
Col4a4Q9QZR9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Col4a4Q9QZR9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms