Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Six6Q9QZ28 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Six6Q9QZ28 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Six6Q9QZ28 Gm45102-201ENSMUST00000207427 857 ntBASIC14.25□□□□□ -0.13
Six6Q9QZ28 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.25□□□□□ -0.13
Six6Q9QZ28 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.25□□□□□ -0.13
Six6Q9QZ28 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.25□□□□□ -0.13
Six6Q9QZ28 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Six6Q9QZ28 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Six6Q9QZ28 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Six6Q9QZ28 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Six6Q9QZ28 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Six6Q9QZ28 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Six6Q9QZ28 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Six6Q9QZ28 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six6Q9QZ28 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Six6Q9QZ28 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six6Q9QZ28 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six6Q9QZ28 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six6Q9QZ28 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six6Q9QZ28 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Six6Q9QZ28 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Six6Q9QZ28 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six6Q9QZ28 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six6Q9QZ28 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Six6Q9QZ28 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six6Q9QZ28 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Six6Q9QZ28 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.24□□□□□ -0.13
Six6Q9QZ28 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Six6Q9QZ28 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six6Q9QZ28 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Six6Q9QZ28 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six6Q9QZ28 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Six6Q9QZ28 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six6Q9QZ28 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six6Q9QZ28 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six6Q9QZ28 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six6Q9QZ28 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six6Q9QZ28 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six6Q9QZ28 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.24□□□□□ -0.13
Six6Q9QZ28 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Six6Q9QZ28 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Six6Q9QZ28 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Six6Q9QZ28 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six6Q9QZ28 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six6Q9QZ28 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Six6Q9QZ28 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six6Q9QZ28 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.23□□□□□ -0.13
Six6Q9QZ28 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC14.23□□□□□ -0.13
Six6Q9QZ28 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Six6Q9QZ28 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six6Q9QZ28 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six6Q9QZ28 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six6Q9QZ28 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Six6Q9QZ28 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six6Q9QZ28 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six6Q9QZ28 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Six6Q9QZ28 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Six6Q9QZ28 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Six6Q9QZ28 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six6Q9QZ28 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six6Q9QZ28 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Six6Q9QZ28 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six6Q9QZ28 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six6Q9QZ28 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six6Q9QZ28 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Six6Q9QZ28 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six6Q9QZ28 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.22□□□□□ -0.13
Six6Q9QZ28 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.22□□□□□ -0.13
Six6Q9QZ28 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Six6Q9QZ28 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six6Q9QZ28 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six6Q9QZ28 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six6Q9QZ28 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Six6Q9QZ28 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six6Q9QZ28 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.22□□□□□ -0.13
Six6Q9QZ28 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six6Q9QZ28 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six6Q9QZ28 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Six6Q9QZ28 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six6Q9QZ28 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six6Q9QZ28 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six6Q9QZ28 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six6Q9QZ28 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six6Q9QZ28 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six6Q9QZ28 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Six6Q9QZ28 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Six6Q9QZ28 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.21□□□□□ -0.13
Six6Q9QZ28 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Six6Q9QZ28 Prob1-201ENSMUST00000097619 3021 ntBASIC14.21□□□□□ -0.13
Six6Q9QZ28 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Six6Q9QZ28 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Six6Q9QZ28 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Six6Q9QZ28 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.21□□□□□ -0.13
Six6Q9QZ28 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.21□□□□□ -0.13
Six6Q9QZ28 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Six6Q9QZ28 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Six6Q9QZ28 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Six6Q9QZ28 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Six6Q9QZ28 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms