Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom3Q9QXN0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom3Q9QXN0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom3Q9QXN0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.74■□□□□ 0.27
Shroom3Q9QXN0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom3Q9QXN0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom3Q9QXN0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom3Q9QXN0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Shroom3Q9QXN0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.74■□□□□ 0.27
Shroom3Q9QXN0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Shroom3Q9QXN0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom3Q9QXN0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.73■□□□□ 0.27
Shroom3Q9QXN0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom3Q9QXN0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom3Q9QXN0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom3Q9QXN0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom3Q9QXN0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom3Q9QXN0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom3Q9QXN0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom3Q9QXN0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom3Q9QXN0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom3Q9QXN0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom3Q9QXN0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom3Q9QXN0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Shroom3Q9QXN0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom3Q9QXN0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.73■□□□□ 0.27
Shroom3Q9QXN0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Shroom3Q9QXN0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.73■□□□□ 0.27
Shroom3Q9QXN0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Shroom3Q9QXN0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom3Q9QXN0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom3Q9QXN0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom3Q9QXN0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom3Q9QXN0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom3Q9QXN0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom3Q9QXN0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom3Q9QXN0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom3Q9QXN0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom3Q9QXN0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom3Q9QXN0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom3Q9QXN0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom3Q9QXN0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Shroom3Q9QXN0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom3Q9QXN0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom3Q9QXN0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom3Q9QXN0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom3Q9QXN0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom3Q9QXN0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
Shroom3Q9QXN0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shroom3Q9QXN0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Shroom3Q9QXN0 Gm17808-201ENSMUST00000200859 894 ntBASIC16.71■□□□□ 0.27
Shroom3Q9QXN0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Shroom3Q9QXN0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shroom3Q9QXN0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shroom3Q9QXN0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shroom3Q9QXN0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shroom3Q9QXN0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Shroom3Q9QXN0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shroom3Q9QXN0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Shroom3Q9QXN0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Shroom3Q9QXN0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.71■□□□□ 0.27
Shroom3Q9QXN0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shroom3Q9QXN0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shroom3Q9QXN0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shroom3Q9QXN0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Shroom3Q9QXN0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.71■□□□□ 0.27
Shroom3Q9QXN0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shroom3Q9QXN0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Shroom3Q9QXN0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shroom3Q9QXN0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Shroom3Q9QXN0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom3Q9QXN0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom3Q9QXN0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom3Q9QXN0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom3Q9QXN0 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.7■□□□□ 0.26
Shroom3Q9QXN0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.7■□□□□ 0.26
Shroom3Q9QXN0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom3Q9QXN0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom3Q9QXN0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom3Q9QXN0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Shroom3Q9QXN0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom3Q9QXN0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom3Q9QXN0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom3Q9QXN0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom3Q9QXN0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom3Q9QXN0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom3Q9QXN0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom3Q9QXN0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom3Q9QXN0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Shroom3Q9QXN0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Shroom3Q9QXN0 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.7■□□□□ 0.26
Shroom3Q9QXN0 Gm7153-201ENSMUST00000117092 455 ntBASIC16.69■□□□□ 0.26
Shroom3Q9QXN0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.69■□□□□ 0.26
Shroom3Q9QXN0 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.69■□□□□ 0.26
Shroom3Q9QXN0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom3Q9QXN0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom3Q9QXN0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom3Q9QXN0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Shroom3Q9QXN0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Shroom3Q9QXN0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms