Protein–RNA interactions for Protein: Q9JJH7

Trpm5, Transient receptor potential cation channel subfamily M member 5, mousemouse

Predictions only

Length 1,158 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm5Q9JJH7 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trpm5Q9JJH7 Gm13312-201ENSMUST00000119631 718 ntBASIC18.16■□□□□ 0.5
Trpm5Q9JJH7 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.16■□□□□ 0.5
Trpm5Q9JJH7 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.16■□□□□ 0.5
Trpm5Q9JJH7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trpm5Q9JJH7 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trpm5Q9JJH7 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.16■□□□□ 0.5
Trpm5Q9JJH7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trpm5Q9JJH7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trpm5Q9JJH7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trpm5Q9JJH7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trpm5Q9JJH7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm5Q9JJH7 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trpm5Q9JJH7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm5Q9JJH7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.13■□□□□ 0.49
Trpm5Q9JJH7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm5Q9JJH7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm5Q9JJH7 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm5Q9JJH7 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm5Q9JJH7 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm5Q9JJH7 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.13■□□□□ 0.49
Trpm5Q9JJH7 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trpm5Q9JJH7 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm5Q9JJH7 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.13■□□□□ 0.49
Trpm5Q9JJH7 Gm18195-201ENSMUST00000207604 706 ntBASIC18.13■□□□□ 0.49
Trpm5Q9JJH7 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.13■□□□□ 0.49
Trpm5Q9JJH7 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trpm5Q9JJH7 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
Trpm5Q9JJH7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm5Q9JJH7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm5Q9JJH7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm5Q9JJH7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trpm5Q9JJH7 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm5Q9JJH7 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Trpm5Q9JJH7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm5Q9JJH7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.13■□□□□ 0.49
Trpm5Q9JJH7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trpm5Q9JJH7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trpm5Q9JJH7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trpm5Q9JJH7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trpm5Q9JJH7 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Trpm5Q9JJH7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.12■□□□□ 0.49
Trpm5Q9JJH7 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.12■□□□□ 0.49
Trpm5Q9JJH7 Gm6296-201ENSMUST00000222599 943 ntBASIC18.12■□□□□ 0.49
Trpm5Q9JJH7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trpm5Q9JJH7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trpm5Q9JJH7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trpm5Q9JJH7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Trpm5Q9JJH7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trpm5Q9JJH7 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms