Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nup50Q9JIH2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup50Q9JIH2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup50Q9JIH2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nup50Q9JIH2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nup50Q9JIH2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup50Q9JIH2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup50Q9JIH2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup50Q9JIH2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup50Q9JIH2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup50Q9JIH2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup50Q9JIH2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup50Q9JIH2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.65■□□□□ 0.42
Nup50Q9JIH2 Mir5122-201ENSMUST00000175004 89 ntBASIC17.65■□□□□ 0.42
Nup50Q9JIH2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.65■□□□□ 0.42
Nup50Q9JIH2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup50Q9JIH2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nup50Q9JIH2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup50Q9JIH2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Nup50Q9JIH2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup50Q9JIH2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Nup50Q9JIH2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Nup50Q9JIH2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nup50Q9JIH2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Nup50Q9JIH2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Nup50Q9JIH2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup50Q9JIH2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup50Q9JIH2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup50Q9JIH2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup50Q9JIH2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup50Q9JIH2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nup50Q9JIH2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Nup50Q9JIH2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nup50Q9JIH2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup50Q9JIH2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup50Q9JIH2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup50Q9JIH2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup50Q9JIH2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nup50Q9JIH2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nup50Q9JIH2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup50Q9JIH2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup50Q9JIH2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Nup50Q9JIH2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Nup50Q9JIH2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Nup50Q9JIH2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.64■□□□□ 0.41
Nup50Q9JIH2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup50Q9JIH2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup50Q9JIH2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup50Q9JIH2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup50Q9JIH2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Nup50Q9JIH2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nup50Q9JIH2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Nup50Q9JIH2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nup50Q9JIH2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup50Q9JIH2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nup50Q9JIH2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.63■□□□□ 0.41
Nup50Q9JIH2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Nup50Q9JIH2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup50Q9JIH2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup50Q9JIH2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup50Q9JIH2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup50Q9JIH2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup50Q9JIH2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Nup50Q9JIH2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup50Q9JIH2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.62■□□□□ 0.41
Nup50Q9JIH2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup50Q9JIH2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup50Q9JIH2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup50Q9JIH2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup50Q9JIH2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup50Q9JIH2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup50Q9JIH2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup50Q9JIH2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nup50Q9JIH2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup50Q9JIH2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.62■□□□□ 0.41
Nup50Q9JIH2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup50Q9JIH2 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.62■□□□□ 0.41
Nup50Q9JIH2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup50Q9JIH2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup50Q9JIH2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.62■□□□□ 0.41
Nup50Q9JIH2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nup50Q9JIH2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup50Q9JIH2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup50Q9JIH2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nup50Q9JIH2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nup50Q9JIH2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup50Q9JIH2 Gm13186-201ENSMUST00000118031 316 ntBASIC17.61■□□□□ 0.41
Nup50Q9JIH2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup50Q9JIH2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup50Q9JIH2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Nup50Q9JIH2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nup50Q9JIH2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.61■□□□□ 0.41
Nup50Q9JIH2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup50Q9JIH2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup50Q9JIH2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup50Q9JIH2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup50Q9JIH2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Nup50Q9JIH2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Nup50Q9JIH2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup50Q9JIH2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms