Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ClpxQ9JHS4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
ClpxQ9JHS4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Gm11927-201ENSMUST00000118472 759 ntBASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Gm10812-201ENSMUST00000099864 546 ntBASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ClpxQ9JHS4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ClpxQ9JHS4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ClpxQ9JHS4 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ClpxQ9JHS4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ClpxQ9JHS4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.31■□□□□ 0.04
ClpxQ9JHS4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ClpxQ9JHS4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ClpxQ9JHS4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ClpxQ9JHS4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ClpxQ9JHS4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ClpxQ9JHS4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ClpxQ9JHS4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.31■□□□□ 0.04
ClpxQ9JHS4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ClpxQ9JHS4 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ClpxQ9JHS4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ClpxQ9JHS4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ClpxQ9JHS4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ClpxQ9JHS4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ClpxQ9JHS4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClpxQ9JHS4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ClpxQ9JHS4 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ClpxQ9JHS4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.3■□□□□ 0.04
ClpxQ9JHS4 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.3■□□□□ 0.04
ClpxQ9JHS4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClpxQ9JHS4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClpxQ9JHS4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ClpxQ9JHS4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
ClpxQ9JHS4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClpxQ9JHS4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClpxQ9JHS4 Zfp783-201ENSMUST00000095946 670 ntBASIC15.3■□□□□ 0.04
ClpxQ9JHS4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClpxQ9JHS4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClpxQ9JHS4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ClpxQ9JHS4 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClpxQ9JHS4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ClpxQ9JHS4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClpxQ9JHS4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClpxQ9JHS4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
ClpxQ9JHS4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.29■□□□□ 0.04
ClpxQ9JHS4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ClpxQ9JHS4 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClpxQ9JHS4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClpxQ9JHS4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ClpxQ9JHS4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClpxQ9JHS4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ClpxQ9JHS4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClpxQ9JHS4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClpxQ9JHS4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.29■□□□□ 0.04
ClpxQ9JHS4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClpxQ9JHS4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClpxQ9JHS4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ClpxQ9JHS4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClpxQ9JHS4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClpxQ9JHS4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClpxQ9JHS4 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClpxQ9JHS4 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.28■□□□□ 0.04
ClpxQ9JHS4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClpxQ9JHS4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ClpxQ9JHS4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClpxQ9JHS4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ClpxQ9JHS4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ClpxQ9JHS4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.28■□□□□ 0.04
ClpxQ9JHS4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ClpxQ9JHS4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClpxQ9JHS4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.28■□□□□ 0.04
ClpxQ9JHS4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ClpxQ9JHS4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClpxQ9JHS4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms