Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Ube3bQ9ES34 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ube3bQ9ES34 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.85■□□□□ 0.77
Ube3bQ9ES34 Mir3081-201ENSMUST00000175305 84 ntBASIC19.85■□□□□ 0.77
Ube3bQ9ES34 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ube3bQ9ES34 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ube3bQ9ES34 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ube3bQ9ES34 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ube3bQ9ES34 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ube3bQ9ES34 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ube3bQ9ES34 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ube3bQ9ES34 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ube3bQ9ES34 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ube3bQ9ES34 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.85■□□□□ 0.77
Ube3bQ9ES34 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.85■□□□□ 0.77
Ube3bQ9ES34 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ube3bQ9ES34 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ube3bQ9ES34 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ube3bQ9ES34 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ube3bQ9ES34 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Ube3bQ9ES34 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ube3bQ9ES34 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ube3bQ9ES34 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ube3bQ9ES34 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ube3bQ9ES34 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.84■□□□□ 0.77
Ube3bQ9ES34 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ube3bQ9ES34 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.84■□□□□ 0.77
Ube3bQ9ES34 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ube3bQ9ES34 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ube3bQ9ES34 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ube3bQ9ES34 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ube3bQ9ES34 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ube3bQ9ES34 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ube3bQ9ES34 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ube3bQ9ES34 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ube3bQ9ES34 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ube3bQ9ES34 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ube3bQ9ES34 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ube3bQ9ES34 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.83■□□□□ 0.77
Ube3bQ9ES34 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Ube3bQ9ES34 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Ube3bQ9ES34 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ube3bQ9ES34 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.83■□□□□ 0.77
Ube3bQ9ES34 Gm18669-201ENSMUST00000216049 778 ntBASIC19.83■□□□□ 0.77
Ube3bQ9ES34 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ube3bQ9ES34 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ube3bQ9ES34 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.83■□□□□ 0.76
Ube3bQ9ES34 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Ube3bQ9ES34 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ube3bQ9ES34 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ube3bQ9ES34 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ube3bQ9ES34 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.76
Ube3bQ9ES34 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
Ube3bQ9ES34 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ube3bQ9ES34 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ube3bQ9ES34 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.83■□□□□ 0.76
Ube3bQ9ES34 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ube3bQ9ES34 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube3bQ9ES34 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube3bQ9ES34 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube3bQ9ES34 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube3bQ9ES34 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.82■□□□□ 0.76
Ube3bQ9ES34 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube3bQ9ES34 Gm28033-201ENSMUST00000184224 96 ntBASIC19.82■□□□□ 0.76
Ube3bQ9ES34 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Ube3bQ9ES34 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube3bQ9ES34 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube3bQ9ES34 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube3bQ9ES34 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube3bQ9ES34 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Ube3bQ9ES34 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube3bQ9ES34 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube3bQ9ES34 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.81■□□□□ 0.76
Ube3bQ9ES34 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube3bQ9ES34 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube3bQ9ES34 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube3bQ9ES34 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube3bQ9ES34 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.81■□□□□ 0.76
Ube3bQ9ES34 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ube3bQ9ES34 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ube3bQ9ES34 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube3bQ9ES34 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ube3bQ9ES34 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube3bQ9ES34 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube3bQ9ES34 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube3bQ9ES34 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ube3bQ9ES34 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube3bQ9ES34 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube3bQ9ES34 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ube3bQ9ES34 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ube3bQ9ES34 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ube3bQ9ES34 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.8■□□□□ 0.76
Ube3bQ9ES34 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ube3bQ9ES34 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ube3bQ9ES34 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Ube3bQ9ES34 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ube3bQ9ES34 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.8■□□□□ 0.76
Ube3bQ9ES34 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ube3bQ9ES34 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ube3bQ9ES34 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms