Protein–RNA interactions for Protein: Q9EQU3

Tlr9, Toll-like receptor 9, mousemouse

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr9Q9EQU3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tlr9Q9EQU3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tlr9Q9EQU3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tlr9Q9EQU3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Tlr9Q9EQU3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tlr9Q9EQU3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tlr9Q9EQU3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tlr9Q9EQU3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tlr9Q9EQU3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tlr9Q9EQU3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tlr9Q9EQU3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.58■□□□□ 0.41
Tlr9Q9EQU3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tlr9Q9EQU3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tlr9Q9EQU3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tlr9Q9EQU3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tlr9Q9EQU3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tlr9Q9EQU3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Tlr9Q9EQU3 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tlr9Q9EQU3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tlr9Q9EQU3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tlr9Q9EQU3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.58■□□□□ 0.4
Tlr9Q9EQU3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.58■□□□□ 0.4
Tlr9Q9EQU3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.58■□□□□ 0.4
Tlr9Q9EQU3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tlr9Q9EQU3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Tlr9Q9EQU3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.58■□□□□ 0.4
Tlr9Q9EQU3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tlr9Q9EQU3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Tlr9Q9EQU3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Tlr9Q9EQU3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tlr9Q9EQU3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr9Q9EQU3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr9Q9EQU3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr9Q9EQU3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Tlr9Q9EQU3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr9Q9EQU3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr9Q9EQU3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Tlr9Q9EQU3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.57■□□□□ 0.4
Tlr9Q9EQU3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr9Q9EQU3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr9Q9EQU3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr9Q9EQU3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tlr9Q9EQU3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr9Q9EQU3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr9Q9EQU3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr9Q9EQU3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Tlr9Q9EQU3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr9Q9EQU3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr9Q9EQU3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr9Q9EQU3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr9Q9EQU3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr9Q9EQU3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr9Q9EQU3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.56■□□□□ 0.4
Tlr9Q9EQU3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.56■□□□□ 0.4
Tlr9Q9EQU3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.56■□□□□ 0.4
Tlr9Q9EQU3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr9Q9EQU3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.56■□□□□ 0.4
Tlr9Q9EQU3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr9Q9EQU3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr9Q9EQU3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr9Q9EQU3 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr9Q9EQU3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr9Q9EQU3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr9Q9EQU3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr9Q9EQU3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr9Q9EQU3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tlr9Q9EQU3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tlr9Q9EQU3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tlr9Q9EQU3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tlr9Q9EQU3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tlr9Q9EQU3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Tlr9Q9EQU3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tlr9Q9EQU3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tlr9Q9EQU3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tlr9Q9EQU3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tlr9Q9EQU3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Tlr9Q9EQU3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tlr9Q9EQU3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tlr9Q9EQU3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Tlr9Q9EQU3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tlr9Q9EQU3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tlr9Q9EQU3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tlr9Q9EQU3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tlr9Q9EQU3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tlr9Q9EQU3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.54■□□□□ 0.4
Tlr9Q9EQU3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tlr9Q9EQU3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Tlr9Q9EQU3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tlr9Q9EQU3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tlr9Q9EQU3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tlr9Q9EQU3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tlr9Q9EQU3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tlr9Q9EQU3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Tlr9Q9EQU3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tlr9Q9EQU3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tlr9Q9EQU3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.54■□□□□ 0.4
Tlr9Q9EQU3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.54■□□□□ 0.4
Tlr9Q9EQU3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Tlr9Q9EQU3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tlr9Q9EQU3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms