Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.34■□□□□ 0.53
Cfap53Q9D439 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap53Q9D439 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap53Q9D439 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap53Q9D439 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cfap53Q9D439 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap53Q9D439 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap53Q9D439 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap53Q9D439 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap53Q9D439 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap53Q9D439 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cfap53Q9D439 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap53Q9D439 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap53Q9D439 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap53Q9D439 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap53Q9D439 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cfap53Q9D439 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cfap53Q9D439 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cfap53Q9D439 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cfap53Q9D439 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Cfap53Q9D439 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cfap53Q9D439 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cfap53Q9D439 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Cfap53Q9D439 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cfap53Q9D439 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cfap53Q9D439 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.33■□□□□ 0.52
Cfap53Q9D439 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.33■□□□□ 0.52
Cfap53Q9D439 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cfap53Q9D439 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Cfap53Q9D439 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cfap53Q9D439 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cfap53Q9D439 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cfap53Q9D439 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap53Q9D439 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap53Q9D439 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cfap53Q9D439 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Cfap53Q9D439 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.32■□□□□ 0.52
Cfap53Q9D439 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.32■□□□□ 0.52
Cfap53Q9D439 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.32■□□□□ 0.52
Cfap53Q9D439 Gm2274-201ENSMUST00000184539 609 ntBASIC18.32■□□□□ 0.52
Cfap53Q9D439 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap53Q9D439 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap53Q9D439 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap53Q9D439 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap53Q9D439 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap53Q9D439 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.31■□□□□ 0.52
Cfap53Q9D439 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap53Q9D439 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap53Q9D439 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cfap53Q9D439 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap53Q9D439 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap53Q9D439 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.31■□□□□ 0.52
Cfap53Q9D439 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Cfap53Q9D439 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap53Q9D439 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap53Q9D439 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap53Q9D439 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap53Q9D439 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Cfap53Q9D439 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap53Q9D439 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap53Q9D439 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap53Q9D439 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.3■□□□□ 0.52
Cfap53Q9D439 Gm11539-201ENSMUST00000119837 557 ntBASIC18.3■□□□□ 0.52
Cfap53Q9D439 Gm13436-201ENSMUST00000120418 567 ntBASIC18.3■□□□□ 0.52
Cfap53Q9D439 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Cfap53Q9D439 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cfap53Q9D439 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.3■□□□□ 0.52
Cfap53Q9D439 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap53Q9D439 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.3■□□□□ 0.52
Cfap53Q9D439 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap53Q9D439 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap53Q9D439 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap53Q9D439 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.29■□□□□ 0.52
Cfap53Q9D439 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap53Q9D439 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.29■□□□□ 0.52
Cfap53Q9D439 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.29■□□□□ 0.52
Cfap53Q9D439 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap53Q9D439 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap53Q9D439 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap53Q9D439 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cfap53Q9D439 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.29■□□□□ 0.52
Cfap53Q9D439 Gm10252-201ENSMUST00000209541 832 ntBASIC18.29■□□□□ 0.52
Cfap53Q9D439 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.29■□□□□ 0.52
Cfap53Q9D439 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap53Q9D439 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap53Q9D439 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap53Q9D439 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cfap53Q9D439 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap53Q9D439 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cfap53Q9D439 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap53Q9D439 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cfap53Q9D439 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap53Q9D439 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap53Q9D439 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap53Q9D439 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap53Q9D439 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap53Q9D439 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap53Q9D439 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cfap53Q9D439 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap53Q9D439 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms