Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Gm7290-201ENSMUST00000104990 617 ntBASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Gm12918-201ENSMUST00000120234 636 ntBASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Gm15710-201ENSMUST00000121821 636 ntBASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Gm5075-201ENSMUST00000196916 622 ntBASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1lQ9CXF7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.94■□□□□ 0.62
Chd1lQ9CXF7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1lQ9CXF7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1lQ9CXF7 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1lQ9CXF7 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1lQ9CXF7 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.94■□□□□ 0.62
Chd1lQ9CXF7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Chd1lQ9CXF7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1lQ9CXF7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.94■□□□□ 0.62
Chd1lQ9CXF7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1lQ9CXF7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1lQ9CXF7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1lQ9CXF7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1lQ9CXF7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1lQ9CXF7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1lQ9CXF7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1lQ9CXF7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1lQ9CXF7 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1lQ9CXF7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Chd1lQ9CXF7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1lQ9CXF7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1lQ9CXF7 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd1lQ9CXF7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd1lQ9CXF7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd1lQ9CXF7 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.92■□□□□ 0.62
Chd1lQ9CXF7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd1lQ9CXF7 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd1lQ9CXF7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.92■□□□□ 0.62
Chd1lQ9CXF7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd1lQ9CXF7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chd1lQ9CXF7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd1lQ9CXF7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd1lQ9CXF7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd1lQ9CXF7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Chd1lQ9CXF7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Chd1lQ9CXF7 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd1lQ9CXF7 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd1lQ9CXF7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd1lQ9CXF7 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Chd1lQ9CXF7 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd1lQ9CXF7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd1lQ9CXF7 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd1lQ9CXF7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd1lQ9CXF7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd1lQ9CXF7 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.91■□□□□ 0.62
Chd1lQ9CXF7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd1lQ9CXF7 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd1lQ9CXF7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd1lQ9CXF7 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms