Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpusd4Q9CWX4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.18□□□□□ -0.14
Rpusd4Q9CWX4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.18□□□□□ -0.14
Rpusd4Q9CWX4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpusd4Q9CWX4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.18□□□□□ -0.14
Rpusd4Q9CWX4 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpusd4Q9CWX4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rpusd4Q9CWX4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rpusd4Q9CWX4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.18□□□□□ -0.14
Rpusd4Q9CWX4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpusd4Q9CWX4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpusd4Q9CWX4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpusd4Q9CWX4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rpusd4Q9CWX4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpusd4Q9CWX4 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpusd4Q9CWX4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpusd4Q9CWX4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Rpusd4Q9CWX4 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Gm29791-202ENSMUST00000207888 369 ntBASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpusd4Q9CWX4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpusd4Q9CWX4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rpusd4Q9CWX4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms