Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh15Q99PJ1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh15Q99PJ1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.94■□□□□ 0.62
Pcdh15Q99PJ1 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.94■□□□□ 0.62
Pcdh15Q99PJ1 Wdyhv1-206ENSMUST00000227142 786 ntBASIC18.94■□□□□ 0.62
Pcdh15Q99PJ1 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh15Q99PJ1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh15Q99PJ1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh15Q99PJ1 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.93■□□□□ 0.62
Pcdh15Q99PJ1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh15Q99PJ1 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh15Q99PJ1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh15Q99PJ1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Pcdh15Q99PJ1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh15Q99PJ1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh15Q99PJ1 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.93■□□□□ 0.62
Pcdh15Q99PJ1 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.93■□□□□ 0.62
Pcdh15Q99PJ1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.93■□□□□ 0.62
Pcdh15Q99PJ1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh15Q99PJ1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh15Q99PJ1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh15Q99PJ1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh15Q99PJ1 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Pcdh15Q99PJ1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh15Q99PJ1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh15Q99PJ1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh15Q99PJ1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh15Q99PJ1 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.92■□□□□ 0.62
Pcdh15Q99PJ1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Pcdh15Q99PJ1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh15Q99PJ1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh15Q99PJ1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh15Q99PJ1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh15Q99PJ1 Gm14057-201ENSMUST00000120631 482 ntBASIC18.91■□□□□ 0.62
Pcdh15Q99PJ1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh15Q99PJ1 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.91■□□□□ 0.62
Pcdh15Q99PJ1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.91■□□□□ 0.62
Pcdh15Q99PJ1 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh15Q99PJ1 Gm8655-201ENSMUST00000221159 852 ntBASIC18.91■□□□□ 0.62
Pcdh15Q99PJ1 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Pcdh15Q99PJ1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh15Q99PJ1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh15Q99PJ1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh15Q99PJ1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh15Q99PJ1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh15Q99PJ1 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh15Q99PJ1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.9■□□□□ 0.62
Pcdh15Q99PJ1 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.9■□□□□ 0.62
Pcdh15Q99PJ1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
Pcdh15Q99PJ1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh15Q99PJ1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh15Q99PJ1 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh15Q99PJ1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh15Q99PJ1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh15Q99PJ1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.9■□□□□ 0.62
Pcdh15Q99PJ1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh15Q99PJ1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Pcdh15Q99PJ1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh15Q99PJ1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh15Q99PJ1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdh15Q99PJ1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdh15Q99PJ1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdh15Q99PJ1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdh15Q99PJ1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh15Q99PJ1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh15Q99PJ1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh15Q99PJ1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh15Q99PJ1 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.89■□□□□ 0.61
Pcdh15Q99PJ1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.89■□□□□ 0.61
Pcdh15Q99PJ1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh15Q99PJ1 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.89■□□□□ 0.61
Pcdh15Q99PJ1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh15Q99PJ1 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh15Q99PJ1 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC18.89■□□□□ 0.61
Pcdh15Q99PJ1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.89■□□□□ 0.61
Pcdh15Q99PJ1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh15Q99PJ1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh15Q99PJ1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh15Q99PJ1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Pcdh15Q99PJ1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh15Q99PJ1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh15Q99PJ1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh15Q99PJ1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh15Q99PJ1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh15Q99PJ1 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh15Q99PJ1 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh15Q99PJ1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh15Q99PJ1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh15Q99PJ1 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh15Q99PJ1 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Pcdh15Q99PJ1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh15Q99PJ1 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh15Q99PJ1 Gm44872-201ENSMUST00000207864 420 ntBASIC18.88■□□□□ 0.61
Pcdh15Q99PJ1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.88■□□□□ 0.61
Pcdh15Q99PJ1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh15Q99PJ1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh15Q99PJ1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Pcdh15Q99PJ1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh15Q99PJ1 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh15Q99PJ1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms