Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RtcbQ99LF4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RtcbQ99LF4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RtcbQ99LF4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.63■□□□□ 0.89
RtcbQ99LF4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RtcbQ99LF4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RtcbQ99LF4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RtcbQ99LF4 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RtcbQ99LF4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RtcbQ99LF4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RtcbQ99LF4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RtcbQ99LF4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC20.62■□□□□ 0.89
RtcbQ99LF4 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RtcbQ99LF4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC20.62■□□□□ 0.89
RtcbQ99LF4 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC20.62■□□□□ 0.89
RtcbQ99LF4 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.62■□□□□ 0.89
RtcbQ99LF4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RtcbQ99LF4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RtcbQ99LF4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.62■□□□□ 0.89
RtcbQ99LF4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RtcbQ99LF4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RtcbQ99LF4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RtcbQ99LF4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RtcbQ99LF4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RtcbQ99LF4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RtcbQ99LF4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC20.61■□□□□ 0.89
RtcbQ99LF4 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC20.61■□□□□ 0.89
RtcbQ99LF4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RtcbQ99LF4 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RtcbQ99LF4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
RtcbQ99LF4 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RtcbQ99LF4 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC20.61■□□□□ 0.89
RtcbQ99LF4 AC154621.1-201ENSMUST00000226155 1119 ntBASIC20.61■□□□□ 0.89
RtcbQ99LF4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RtcbQ99LF4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RtcbQ99LF4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RtcbQ99LF4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RtcbQ99LF4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RtcbQ99LF4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RtcbQ99LF4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RtcbQ99LF4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RtcbQ99LF4 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RtcbQ99LF4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RtcbQ99LF4 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RtcbQ99LF4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.6■□□□□ 0.89
RtcbQ99LF4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RtcbQ99LF4 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RtcbQ99LF4 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RtcbQ99LF4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RtcbQ99LF4 Gm23935-201ENSMUST00000102303 57 ntBASIC20.6■□□□□ 0.89
RtcbQ99LF4 Gm24270-201ENSMUST00000102326 57 ntBASIC20.6■□□□□ 0.89
RtcbQ99LF4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
RtcbQ99LF4 Gm14494-201ENSMUST00000118786 435 ntBASIC20.6■□□□□ 0.89
RtcbQ99LF4 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC20.6■□□□□ 0.89
RtcbQ99LF4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RtcbQ99LF4 Gm24245-201ENSMUST00000157318 57 ntBASIC20.6■□□□□ 0.89
RtcbQ99LF4 AV026068-213ENSMUST00000223675 1171 ntBASIC20.6■□□□□ 0.89
RtcbQ99LF4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RtcbQ99LF4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RtcbQ99LF4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RtcbQ99LF4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RtcbQ99LF4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RtcbQ99LF4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RtcbQ99LF4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RtcbQ99LF4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.59■□□□□ 0.89
RtcbQ99LF4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RtcbQ99LF4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RtcbQ99LF4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RtcbQ99LF4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RtcbQ99LF4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RtcbQ99LF4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RtcbQ99LF4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.59■□□□□ 0.89
RtcbQ99LF4 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RtcbQ99LF4 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RtcbQ99LF4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RtcbQ99LF4 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RtcbQ99LF4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC20.59■□□□□ 0.89
RtcbQ99LF4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RtcbQ99LF4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RtcbQ99LF4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RtcbQ99LF4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.59■□□□□ 0.89
RtcbQ99LF4 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.59■□□□□ 0.89
RtcbQ99LF4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RtcbQ99LF4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RtcbQ99LF4 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RtcbQ99LF4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RtcbQ99LF4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RtcbQ99LF4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RtcbQ99LF4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RtcbQ99LF4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RtcbQ99LF4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RtcbQ99LF4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC20.58■□□□□ 0.89
RtcbQ99LF4 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC20.58■□□□□ 0.89
RtcbQ99LF4 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.58■□□□□ 0.89
RtcbQ99LF4 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RtcbQ99LF4 Gm43935-201ENSMUST00000203569 1050 ntBASIC20.58■□□□□ 0.89
RtcbQ99LF4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC20.58■□□□□ 0.89
RtcbQ99LF4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RtcbQ99LF4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RtcbQ99LF4 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms