Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc1bQ920F6 Mir770-201ENSMUST00000103252 94 ntBASIC19.24■□□□□ 0.67
Smc1bQ920F6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.24■□□□□ 0.67
Smc1bQ920F6 Gm13401-201ENSMUST00000117074 291 ntBASIC19.24■□□□□ 0.67
Smc1bQ920F6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Smc1bQ920F6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc1bQ920F6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Smc1bQ920F6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc1bQ920F6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc1bQ920F6 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc1bQ920F6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc1bQ920F6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smc1bQ920F6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc1bQ920F6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Smc1bQ920F6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smc1bQ920F6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc1bQ920F6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc1bQ920F6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc1bQ920F6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc1bQ920F6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc1bQ920F6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc1bQ920F6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc1bQ920F6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc1bQ920F6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc1bQ920F6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc1bQ920F6 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc1bQ920F6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc1bQ920F6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc1bQ920F6 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
Smc1bQ920F6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc1bQ920F6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc1bQ920F6 AW822252-206ENSMUST00000208904 237 ntBASIC19.23■□□□□ 0.67
Smc1bQ920F6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc1bQ920F6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Smc1bQ920F6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc1bQ920F6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc1bQ920F6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc1bQ920F6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc1bQ920F6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc1bQ920F6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc1bQ920F6 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc1bQ920F6 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Smc1bQ920F6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc1bQ920F6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smc1bQ920F6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc1bQ920F6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc1bQ920F6 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.22■□□□□ 0.67
Smc1bQ920F6 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smc1bQ920F6 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.22■□□□□ 0.67
Smc1bQ920F6 Gm10566-201ENSMUST00000086739 996 ntBASIC19.22■□□□□ 0.67
Smc1bQ920F6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc1bQ920F6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc1bQ920F6 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Smc1bQ920F6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Smc1bQ920F6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc1bQ920F6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc1bQ920F6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc1bQ920F6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc1bQ920F6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc1bQ920F6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Smc1bQ920F6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Smc1bQ920F6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc1bQ920F6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc1bQ920F6 Mir8098-201ENSMUST00000184011 137 ntBASIC19.21■□□□□ 0.67
Smc1bQ920F6 Gm5864-201ENSMUST00000202263 970 ntBASIC19.21■□□□□ 0.67
Smc1bQ920F6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc1bQ920F6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc1bQ920F6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc1bQ920F6 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smc1bQ920F6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc1bQ920F6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc1bQ920F6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
Smc1bQ920F6 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc1bQ920F6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Smc1bQ920F6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.2■□□□□ 0.66
Smc1bQ920F6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc1bQ920F6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Smc1bQ920F6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smc1bQ920F6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc1bQ920F6 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc1bQ920F6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.2■□□□□ 0.66
Smc1bQ920F6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.2■□□□□ 0.66
Smc1bQ920F6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc1bQ920F6 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.2■□□□□ 0.66
Smc1bQ920F6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc1bQ920F6 Gm37722-201ENSMUST00000193757 208 ntBASIC19.2■□□□□ 0.66
Smc1bQ920F6 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Smc1bQ920F6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc1bQ920F6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc1bQ920F6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Smc1bQ920F6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc1bQ920F6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Smc1bQ920F6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smc1bQ920F6 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Smc1bQ920F6 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.19■□□□□ 0.66
Smc1bQ920F6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc1bQ920F6 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc1bQ920F6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.19■□□□□ 0.66
Smc1bQ920F6 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc1bQ920F6 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms