Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb3Q91XZ7 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb3Q91XZ7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Pcdhb3Q91XZ7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pcdhb3Q91XZ7 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb3Q91XZ7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb3Q91XZ7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhb3Q91XZ7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb3Q91XZ7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb3Q91XZ7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.74■□□□□ 0.27
Pcdhb3Q91XZ7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb3Q91XZ7 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb3Q91XZ7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Dio3-201ENSMUST00000097228 1449 ntBASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Gm10812-201ENSMUST00000099864 546 ntBASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb3Q91XZ7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb3Q91XZ7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb3Q91XZ7 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb3Q91XZ7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb3Q91XZ7 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb3Q91XZ7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb3Q91XZ7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb3Q91XZ7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb3Q91XZ7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb3Q91XZ7 Gm2399-201ENSMUST00000104944 225 ntBASIC16.72■□□□□ 0.27
Pcdhb3Q91XZ7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb3Q91XZ7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdhb3Q91XZ7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb3Q91XZ7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdhb3Q91XZ7 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.72■□□□□ 0.27
Pcdhb3Q91XZ7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb3Q91XZ7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb3Q91XZ7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb3Q91XZ7 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb3Q91XZ7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.72■□□□□ 0.27
Pcdhb3Q91XZ7 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb3Q91XZ7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb3Q91XZ7 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.72■□□□□ 0.27
Pcdhb3Q91XZ7 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb3Q91XZ7 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb3Q91XZ7 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhb3Q91XZ7 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhb3Q91XZ7 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb3Q91XZ7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb3Q91XZ7 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb3Q91XZ7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Pcdhb3Q91XZ7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhb3Q91XZ7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Pcdhb3Q91XZ7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb3Q91XZ7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb3Q91XZ7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb3Q91XZ7 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhb3Q91XZ7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb3Q91XZ7 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb3Q91XZ7 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb3Q91XZ7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb3Q91XZ7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb3Q91XZ7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb3Q91XZ7 Flg-201ENSMUST00000050758 1488 ntBASIC16.7■□□□□ 0.26
Pcdhb3Q91XZ7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb3Q91XZ7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.7■□□□□ 0.26
Pcdhb3Q91XZ7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb3Q91XZ7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb3Q91XZ7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.7■□□□□ 0.26
Pcdhb3Q91XZ7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb3Q91XZ7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb3Q91XZ7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb3Q91XZ7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb3Q91XZ7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
Pcdhb3Q91XZ7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb3Q91XZ7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb3Q91XZ7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb3Q91XZ7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb3Q91XZ7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb3Q91XZ7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb3Q91XZ7 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb3Q91XZ7 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms