Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdhb4Q91XZ6 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb4Q91XZ6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb4Q91XZ6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb4Q91XZ6 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb4Q91XZ6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb4Q91XZ6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb4Q91XZ6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.6■□□□□ 0.25
Pcdhb4Q91XZ6 Gm13216-201ENSMUST00000117145 591 ntBASIC16.6■□□□□ 0.25
Pcdhb4Q91XZ6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdhb4Q91XZ6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Pcdhb4Q91XZ6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdhb4Q91XZ6 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.6■□□□□ 0.25
Pcdhb4Q91XZ6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb4Q91XZ6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb4Q91XZ6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb4Q91XZ6 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhb4Q91XZ6 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb4Q91XZ6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhb4Q91XZ6 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Pcdhb4Q91XZ6 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb4Q91XZ6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb4Q91XZ6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Pcdhb4Q91XZ6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb4Q91XZ6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Pcdhb4Q91XZ6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb4Q91XZ6 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb4Q91XZ6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb4Q91XZ6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb4Q91XZ6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdhb4Q91XZ6 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhb4Q91XZ6 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb4Q91XZ6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhb4Q91XZ6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb4Q91XZ6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhb4Q91XZ6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhb4Q91XZ6 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb4Q91XZ6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb4Q91XZ6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb4Q91XZ6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb4Q91XZ6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhb4Q91XZ6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.57■□□□□ 0.24
Pcdhb4Q91XZ6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb4Q91XZ6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.57■□□□□ 0.24
Pcdhb4Q91XZ6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.57■□□□□ 0.24
Pcdhb4Q91XZ6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb4Q91XZ6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb4Q91XZ6 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhb4Q91XZ6 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb4Q91XZ6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb4Q91XZ6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb4Q91XZ6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms