Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhb8Q91XZ2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb8Q91XZ2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb8Q91XZ2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb8Q91XZ2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb8Q91XZ2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb8Q91XZ2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhb8Q91XZ2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb8Q91XZ2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.32■□□□□ 0.2
Pcdhb8Q91XZ2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhb8Q91XZ2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.32■□□□□ 0.2
Pcdhb8Q91XZ2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb8Q91XZ2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb8Q91XZ2 Gm27463-201ENSMUST00000183569 57 ntBASIC16.32■□□□□ 0.2
Pcdhb8Q91XZ2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.32■□□□□ 0.2
Pcdhb8Q91XZ2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb8Q91XZ2 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.32■□□□□ 0.2
Pcdhb8Q91XZ2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Pcdhb8Q91XZ2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb8Q91XZ2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb8Q91XZ2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb8Q91XZ2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb8Q91XZ2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb8Q91XZ2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb8Q91XZ2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb8Q91XZ2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb8Q91XZ2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhb8Q91XZ2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhb8Q91XZ2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb8Q91XZ2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb8Q91XZ2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb8Q91XZ2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb8Q91XZ2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.31■□□□□ 0.2
Pcdhb8Q91XZ2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb8Q91XZ2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb8Q91XZ2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb8Q91XZ2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Pcdhb8Q91XZ2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb8Q91XZ2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Pcdhb8Q91XZ2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb8Q91XZ2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb8Q91XZ2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb8Q91XZ2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.31■□□□□ 0.2
Pcdhb8Q91XZ2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb8Q91XZ2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb8Q91XZ2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb8Q91XZ2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb8Q91XZ2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb8Q91XZ2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb8Q91XZ2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb8Q91XZ2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb8Q91XZ2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb8Q91XZ2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.29■□□□□ 0.2
Pcdhb8Q91XZ2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhb8Q91XZ2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb8Q91XZ2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb8Q91XZ2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb8Q91XZ2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb8Q91XZ2 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb8Q91XZ2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb8Q91XZ2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.29■□□□□ 0.2
Pcdhb8Q91XZ2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb8Q91XZ2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.29■□□□□ 0.2
Pcdhb8Q91XZ2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb8Q91XZ2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb8Q91XZ2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb8Q91XZ2 Gm5417-201ENSMUST00000079706 384 ntBASIC16.29■□□□□ 0.2
Pcdhb8Q91XZ2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb8Q91XZ2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb8Q91XZ2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms