Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga3Q91XY5 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.91□□□□□ -0.02
Pcdhga3Q91XY5 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Pcdhga3Q91XY5 Odf3b-204ENSMUST00000227834 930 ntBASIC14.91□□□□□ -0.02
Pcdhga3Q91XY5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga3Q91XY5 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga3Q91XY5 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga3Q91XY5 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga3Q91XY5 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga3Q91XY5 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga3Q91XY5 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga3Q91XY5 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga3Q91XY5 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga3Q91XY5 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhga3Q91XY5 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga3Q91XY5 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhga3Q91XY5 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga3Q91XY5 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Gm17661-201ENSMUST00000170317 270 ntBASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhga3Q91XY5 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga3Q91XY5 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga3Q91XY5 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhga3Q91XY5 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga3Q91XY5 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga3Q91XY5 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhga3Q91XY5 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga3Q91XY5 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdhga3Q91XY5 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga3Q91XY5 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.89□□□□□ -0.03
Pcdhga3Q91XY5 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Pcdhga3Q91XY5 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga3Q91XY5 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga3Q91XY5 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga3Q91XY5 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga3Q91XY5 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga3Q91XY5 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.89□□□□□ -0.03
Pcdhga3Q91XY5 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga3Q91XY5 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga3Q91XY5 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga3Q91XY5 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhga3Q91XY5 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga3Q91XY5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhga3Q91XY5 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga3Q91XY5 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga3Q91XY5 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms