Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga6Q91XY2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhga6Q91XY2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga6Q91XY2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Pcdhga6Q91XY2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga6Q91XY2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga6Q91XY2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhga6Q91XY2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhga6Q91XY2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga6Q91XY2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga6Q91XY2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga6Q91XY2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.62■□□□□ 0.25
Pcdhga6Q91XY2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga6Q91XY2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga6Q91XY2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhga6Q91XY2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga6Q91XY2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga6Q91XY2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga6Q91XY2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdhga6Q91XY2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.61■□□□□ 0.25
Pcdhga6Q91XY2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdhga6Q91XY2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Pcdhga6Q91XY2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdhga6Q91XY2 Actl10-202ENSMUST00000226583 1501 ntBASIC16.61■□□□□ 0.25
Pcdhga6Q91XY2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga6Q91XY2 Gm12895-201ENSMUST00000122214 226 ntBASIC16.61■□□□□ 0.25
Pcdhga6Q91XY2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga6Q91XY2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.61■□□□□ 0.25
Pcdhga6Q91XY2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.61■□□□□ 0.25
Pcdhga6Q91XY2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga6Q91XY2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga6Q91XY2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhga6Q91XY2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.61■□□□□ 0.25
Pcdhga6Q91XY2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga6Q91XY2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga6Q91XY2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga6Q91XY2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhga6Q91XY2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga6Q91XY2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga6Q91XY2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhga6Q91XY2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga6Q91XY2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdhga6Q91XY2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga6Q91XY2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga6Q91XY2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga6Q91XY2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga6Q91XY2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.59■□□□□ 0.25
Pcdhga6Q91XY2 Gm11452-201ENSMUST00000122376 690 ntBASIC16.59■□□□□ 0.25
Pcdhga6Q91XY2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga6Q91XY2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga6Q91XY2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdhga6Q91XY2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.59■□□□□ 0.25
Pcdhga6Q91XY2 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga6Q91XY2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga6Q91XY2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga6Q91XY2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga6Q91XY2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga6Q91XY2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhga6Q91XY2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhga6Q91XY2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhga6Q91XY2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhga6Q91XY2 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.58■□□□□ 0.25
Pcdhga6Q91XY2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Pcdhga6Q91XY2 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.58■□□□□ 0.24
Pcdhga6Q91XY2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhga6Q91XY2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Pcdhga6Q91XY2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhga6Q91XY2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhga6Q91XY2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhga6Q91XY2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhga6Q91XY2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhga6Q91XY2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhga6Q91XY2 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.58■□□□□ 0.24
Pcdhga6Q91XY2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.58■□□□□ 0.24
Pcdhga6Q91XY2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms