Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhgb4Q91XX6 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgb4Q91XX6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgb4Q91XX6 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pcdhgb4Q91XX6 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgb4Q91XX6 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgb4Q91XX6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pcdhgb4Q91XX6 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.7■□□□□ 0.42
Pcdhgb4Q91XX6 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdhgb4Q91XX6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.7■□□□□ 0.42
Pcdhgb4Q91XX6 Gm5417-201ENSMUST00000079706 384 ntBASIC17.7■□□□□ 0.42
Pcdhgb4Q91XX6 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdhgb4Q91XX6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgb4Q91XX6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgb4Q91XX6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgb4Q91XX6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgb4Q91XX6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgb4Q91XX6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgb4Q91XX6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pcdhgb4Q91XX6 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgb4Q91XX6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb4Q91XX6 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb4Q91XX6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhgb4Q91XX6 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb4Q91XX6 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb4Q91XX6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhgb4Q91XX6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb4Q91XX6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb4Q91XX6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb4Q91XX6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb4Q91XX6 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.68■□□□□ 0.42
Pcdhgb4Q91XX6 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.68■□□□□ 0.42
Pcdhgb4Q91XX6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.68■□□□□ 0.42
Pcdhgb4Q91XX6 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.68■□□□□ 0.42
Pcdhgb4Q91XX6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb4Q91XX6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb4Q91XX6 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb4Q91XX6 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb4Q91XX6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhgb4Q91XX6 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb4Q91XX6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb4Q91XX6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb4Q91XX6 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgb4Q91XX6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgb4Q91XX6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pcdhgb4Q91XX6 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgb4Q91XX6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhgb4Q91XX6 Gm13323-201ENSMUST00000120245 1151 ntBASIC17.67■□□□□ 0.42
Pcdhgb4Q91XX6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.67■□□□□ 0.42
Pcdhgb4Q91XX6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.67■□□□□ 0.42
Pcdhgb4Q91XX6 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Pcdhgb4Q91XX6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgb4Q91XX6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgb4Q91XX6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgb4Q91XX6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgb4Q91XX6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgb4Q91XX6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgb4Q91XX6 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgb4Q91XX6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgb4Q91XX6 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgb4Q91XX6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhgb4Q91XX6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhgb4Q91XX6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.66■□□□□ 0.42
Pcdhgb4Q91XX6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgb4Q91XX6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgb4Q91XX6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pcdhgb4Q91XX6 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgb4Q91XX6 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pcdhgb4Q91XX6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhgb4Q91XX6 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgb4Q91XX6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgb4Q91XX6 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Pcdhgb4Q91XX6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgb4Q91XX6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms