Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgc3Q91XX1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgc3Q91XX1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgc3Q91XX1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgc3Q91XX1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgc3Q91XX1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgc3Q91XX1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgc3Q91XX1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgc3Q91XX1 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgc3Q91XX1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdhgc3Q91XX1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhgc3Q91XX1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Pcdhgc3Q91XX1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhgc3Q91XX1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhgc3Q91XX1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhgc3Q91XX1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhgc3Q91XX1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgc3Q91XX1 Gm2399-201ENSMUST00000104944 225 ntBASIC15.83■□□□□ 0.12
Pcdhgc3Q91XX1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Pcdhgc3Q91XX1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgc3Q91XX1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgc3Q91XX1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Pcdhgc3Q91XX1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Pcdhgc3Q91XX1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgc3Q91XX1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgc3Q91XX1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgc3Q91XX1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgc3Q91XX1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgc3Q91XX1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgc3Q91XX1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgc3Q91XX1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgc3Q91XX1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdhgc3Q91XX1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgc3Q91XX1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pcdhgc3Q91XX1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgc3Q91XX1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgc3Q91XX1 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgc3Q91XX1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Pcdhgc3Q91XX1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgc3Q91XX1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhgc3Q91XX1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhgc3Q91XX1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgc3Q91XX1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgc3Q91XX1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Pcdhgc3Q91XX1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.82■□□□□ 0.12
Pcdhgc3Q91XX1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgc3Q91XX1 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.82■□□□□ 0.12
Pcdhgc3Q91XX1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgc3Q91XX1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgc3Q91XX1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgc3Q91XX1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgc3Q91XX1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgc3Q91XX1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgc3Q91XX1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgc3Q91XX1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgc3Q91XX1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhgc3Q91XX1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgc3Q91XX1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgc3Q91XX1 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgc3Q91XX1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgc3Q91XX1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.81■□□□□ 0.12
Pcdhgc3Q91XX1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgc3Q91XX1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgc3Q91XX1 Gm6211-202ENSMUST00000167849 925 ntBASIC15.81■□□□□ 0.12
Pcdhgc3Q91XX1 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgc3Q91XX1 Gm37179-201ENSMUST00000194862 823 ntBASIC15.81■□□□□ 0.12
Pcdhgc3Q91XX1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.81■□□□□ 0.12
Pcdhgc3Q91XX1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhgc3Q91XX1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgc3Q91XX1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.81■□□□□ 0.12
Pcdhgc3Q91XX1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgc3Q91XX1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgc3Q91XX1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgc3Q91XX1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhgc3Q91XX1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgc3Q91XX1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgc3Q91XX1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgc3Q91XX1 Gm10602-201ENSMUST00000098239 609 ntBASIC15.81■□□□□ 0.12
Pcdhgc3Q91XX1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgc3Q91XX1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgc3Q91XX1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgc3Q91XX1 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgc3Q91XX1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhgc3Q91XX1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgc3Q91XX1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
Pcdhgc3Q91XX1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgc3Q91XX1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgc3Q91XX1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgc3Q91XX1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgc3Q91XX1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgc3Q91XX1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgc3Q91XX1 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.8■□□□□ 0.12
Pcdhgc3Q91XX1 Gm19891-201ENSMUST00000189771 303 ntBASIC15.8■□□□□ 0.12
Pcdhgc3Q91XX1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.8■□□□□ 0.12
Pcdhgc3Q91XX1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgc3Q91XX1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pcdhgc3Q91XX1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pcdhgc3Q91XX1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgc3Q91XX1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgc3Q91XX1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms