Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trex1Q91XB0 Gm27867-201ENSMUST00000184778 125 ntBASIC19.13■□□□□ 0.65
Trex1Q91XB0 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.13■□□□□ 0.65
Trex1Q91XB0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trex1Q91XB0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trex1Q91XB0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Trex1Q91XB0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trex1Q91XB0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trex1Q91XB0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trex1Q91XB0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trex1Q91XB0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trex1Q91XB0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trex1Q91XB0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trex1Q91XB0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.12■□□□□ 0.65
Trex1Q91XB0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Trex1Q91XB0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trex1Q91XB0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Trex1Q91XB0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trex1Q91XB0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trex1Q91XB0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trex1Q91XB0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
Trex1Q91XB0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.12■□□□□ 0.65
Trex1Q91XB0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
Trex1Q91XB0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trex1Q91XB0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trex1Q91XB0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trex1Q91XB0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trex1Q91XB0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trex1Q91XB0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trex1Q91XB0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trex1Q91XB0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trex1Q91XB0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trex1Q91XB0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trex1Q91XB0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.11■□□□□ 0.65
Trex1Q91XB0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.11■□□□□ 0.65
Trex1Q91XB0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trex1Q91XB0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trex1Q91XB0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trex1Q91XB0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trex1Q91XB0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Trex1Q91XB0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trex1Q91XB0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trex1Q91XB0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trex1Q91XB0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trex1Q91XB0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trex1Q91XB0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trex1Q91XB0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.1■□□□□ 0.65
Trex1Q91XB0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trex1Q91XB0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.1■□□□□ 0.65
Trex1Q91XB0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
Trex1Q91XB0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trex1Q91XB0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trex1Q91XB0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trex1Q91XB0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trex1Q91XB0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trex1Q91XB0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trex1Q91XB0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trex1Q91XB0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trex1Q91XB0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trex1Q91XB0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trex1Q91XB0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trex1Q91XB0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.09■□□□□ 0.65
Trex1Q91XB0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trex1Q91XB0 Gm15165-201ENSMUST00000118140 502 ntBASIC19.09■□□□□ 0.65
Trex1Q91XB0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trex1Q91XB0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Trex1Q91XB0 Gm44454-201ENSMUST00000198541 138 ntBASIC19.09■□□□□ 0.65
Trex1Q91XB0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trex1Q91XB0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trex1Q91XB0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trex1Q91XB0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trex1Q91XB0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Trex1Q91XB0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.08■□□□□ 0.65
Trex1Q91XB0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trex1Q91XB0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trex1Q91XB0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms