Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Tram1Q91V04 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tram1Q91V04 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tram1Q91V04 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tram1Q91V04 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Tram1Q91V04 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tram1Q91V04 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Tram1Q91V04 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tram1Q91V04 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
Tram1Q91V04 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.43□□□□□ -0.1
Tram1Q91V04 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tram1Q91V04 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tram1Q91V04 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tram1Q91V04 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Tram1Q91V04 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tram1Q91V04 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tram1Q91V04 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tram1Q91V04 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tram1Q91V04 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tram1Q91V04 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Tram1Q91V04 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tram1Q91V04 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Tram1Q91V04 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tram1Q91V04 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tram1Q91V04 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tram1Q91V04 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tram1Q91V04 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Tram1Q91V04 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tram1Q91V04 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.42□□□□□ -0.1
Tram1Q91V04 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Tram1Q91V04 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tram1Q91V04 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tram1Q91V04 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Tram1Q91V04 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Tram1Q91V04 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tram1Q91V04 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tram1Q91V04 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Tram1Q91V04 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.42□□□□□ -0.1
Tram1Q91V04 Gm44549-201ENSMUST00000208351 577 ntBASIC14.42□□□□□ -0.1
Tram1Q91V04 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.42□□□□□ -0.1
Tram1Q91V04 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Tram1Q91V04 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tram1Q91V04 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tram1Q91V04 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tram1Q91V04 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tram1Q91V04 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tram1Q91V04 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tram1Q91V04 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Tram1Q91V04 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.42□□□□□ -0.1
Tram1Q91V04 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tram1Q91V04 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tram1Q91V04 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tram1Q91V04 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tram1Q91V04 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tram1Q91V04 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tram1Q91V04 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tram1Q91V04 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Tram1Q91V04 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tram1Q91V04 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.41□□□□□ -0.1
Tram1Q91V04 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tram1Q91V04 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Tram1Q91V04 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tram1Q91V04 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Tram1Q91V04 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.41□□□□□ -0.1
Tram1Q91V04 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tram1Q91V04 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tram1Q91V04 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tram1Q91V04 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tram1Q91V04 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tram1Q91V04 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Tram1Q91V04 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tram1Q91V04 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Tram1Q91V04 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tram1Q91V04 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tram1Q91V04 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tram1Q91V04 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tram1Q91V04 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tram1Q91V04 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tram1Q91V04 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tram1Q91V04 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tram1Q91V04 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tram1Q91V04 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tram1Q91V04 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tram1Q91V04 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tram1Q91V04 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Tram1Q91V04 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tram1Q91V04 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tram1Q91V04 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tram1Q91V04 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Tram1Q91V04 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tram1Q91V04 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.4□□□□□ -0.1
Tram1Q91V04 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tram1Q91V04 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tram1Q91V04 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tram1Q91V04 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tram1Q91V04 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.4□□□□□ -0.1
Tram1Q91V04 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tram1Q91V04 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tram1Q91V04 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tram1Q91V04 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms