Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
StrcQ8VIM6 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
StrcQ8VIM6 Gm14701-201ENSMUST00000117156 348 ntBASIC19.95■□□□□ 0.78
StrcQ8VIM6 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
StrcQ8VIM6 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC19.95■□□□□ 0.78
StrcQ8VIM6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
StrcQ8VIM6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
StrcQ8VIM6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
StrcQ8VIM6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
StrcQ8VIM6 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
StrcQ8VIM6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
StrcQ8VIM6 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
StrcQ8VIM6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.94■□□□□ 0.78
StrcQ8VIM6 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
StrcQ8VIM6 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
StrcQ8VIM6 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
StrcQ8VIM6 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
StrcQ8VIM6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
StrcQ8VIM6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
StrcQ8VIM6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
StrcQ8VIM6 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
StrcQ8VIM6 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
StrcQ8VIM6 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
StrcQ8VIM6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.93■□□□□ 0.78
StrcQ8VIM6 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
StrcQ8VIM6 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
StrcQ8VIM6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
StrcQ8VIM6 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
StrcQ8VIM6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
StrcQ8VIM6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
StrcQ8VIM6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
StrcQ8VIM6 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
StrcQ8VIM6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.92■□□□□ 0.78
StrcQ8VIM6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
StrcQ8VIM6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
StrcQ8VIM6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
StrcQ8VIM6 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
StrcQ8VIM6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
StrcQ8VIM6 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
StrcQ8VIM6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
StrcQ8VIM6 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
StrcQ8VIM6 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC19.92■□□□□ 0.78
StrcQ8VIM6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
StrcQ8VIM6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
StrcQ8VIM6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
StrcQ8VIM6 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
StrcQ8VIM6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
StrcQ8VIM6 Gm15920-201ENSMUST00000118998 402 ntBASIC19.91■□□□□ 0.78
StrcQ8VIM6 Gm13597-201ENSMUST00000121239 375 ntBASIC19.91■□□□□ 0.78
StrcQ8VIM6 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
StrcQ8VIM6 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
StrcQ8VIM6 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.91■□□□□ 0.78
StrcQ8VIM6 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
StrcQ8VIM6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
StrcQ8VIM6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
StrcQ8VIM6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
StrcQ8VIM6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
StrcQ8VIM6 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
StrcQ8VIM6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
StrcQ8VIM6 Gm14057-201ENSMUST00000120631 482 ntBASIC19.9■□□□□ 0.78
StrcQ8VIM6 Mir6956-201ENSMUST00000183598 62 ntBASIC19.9■□□□□ 0.78
StrcQ8VIM6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
StrcQ8VIM6 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.9■□□□□ 0.78
StrcQ8VIM6 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
StrcQ8VIM6 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
StrcQ8VIM6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
StrcQ8VIM6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
StrcQ8VIM6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
StrcQ8VIM6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
StrcQ8VIM6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
StrcQ8VIM6 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
StrcQ8VIM6 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
StrcQ8VIM6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
StrcQ8VIM6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
StrcQ8VIM6 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC19.89■□□□□ 0.77
StrcQ8VIM6 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
StrcQ8VIM6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC19.89■□□□□ 0.77
StrcQ8VIM6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
StrcQ8VIM6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
StrcQ8VIM6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
StrcQ8VIM6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
StrcQ8VIM6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
StrcQ8VIM6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
StrcQ8VIM6 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
StrcQ8VIM6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
StrcQ8VIM6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
StrcQ8VIM6 Gm5253-201ENSMUST00000187104 1025 ntBASIC19.88■□□□□ 0.77
StrcQ8VIM6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.88■□□□□ 0.77
StrcQ8VIM6 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
StrcQ8VIM6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
StrcQ8VIM6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
StrcQ8VIM6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
StrcQ8VIM6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
StrcQ8VIM6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.88■□□□□ 0.77
StrcQ8VIM6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
StrcQ8VIM6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.88■□□□□ 0.77
StrcQ8VIM6 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
StrcQ8VIM6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
StrcQ8VIM6 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
StrcQ8VIM6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms