Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.01□□□□□ -0.17
H1fooQ8VIK3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Odf3b-204ENSMUST00000227834 930 ntBASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
H1fooQ8VIK3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
H1fooQ8VIK3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H1fooQ8VIK3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H1fooQ8VIK3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H1fooQ8VIK3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H1fooQ8VIK3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H1fooQ8VIK3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
H1fooQ8VIK3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
H1fooQ8VIK3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
H1fooQ8VIK3 Gm13181-201ENSMUST00000120117 1069 ntBASIC14□□□□□ -0.17
H1fooQ8VIK3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14□□□□□ -0.17
H1fooQ8VIK3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14□□□□□ -0.17
H1fooQ8VIK3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14□□□□□ -0.17
H1fooQ8VIK3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H1fooQ8VIK3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14□□□□□ -0.17
H1fooQ8VIK3 Gm7791-201ENSMUST00000219066 539 ntBASIC14□□□□□ -0.17
H1fooQ8VIK3 AC107711.5-202ENSMUST00000226429 702 ntBASIC14□□□□□ -0.17
H1fooQ8VIK3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H1fooQ8VIK3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H1fooQ8VIK3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
H1fooQ8VIK3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14□□□□□ -0.17
H1fooQ8VIK3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
H1fooQ8VIK3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
H1fooQ8VIK3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
H1fooQ8VIK3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14□□□□□ -0.17
H1fooQ8VIK3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H1fooQ8VIK3 Gm8839-201ENSMUST00000121279 1645 ntBASIC14□□□□□ -0.17
H1fooQ8VIK3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14□□□□□ -0.17
H1fooQ8VIK3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H1fooQ8VIK3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14□□□□□ -0.17
H1fooQ8VIK3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H1fooQ8VIK3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
H1fooQ8VIK3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
H1fooQ8VIK3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14□□□□□ -0.17
H1fooQ8VIK3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H1fooQ8VIK3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
H1fooQ8VIK3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H1fooQ8VIK3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.99□□□□□ -0.17
H1fooQ8VIK3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H1fooQ8VIK3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H1fooQ8VIK3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
H1fooQ8VIK3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.99□□□□□ -0.17
H1fooQ8VIK3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.99□□□□□ -0.17
H1fooQ8VIK3 Gm3375-201ENSMUST00000203929 796 ntBASIC13.99□□□□□ -0.17
H1fooQ8VIK3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
H1fooQ8VIK3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H1fooQ8VIK3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H1fooQ8VIK3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H1fooQ8VIK3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H1fooQ8VIK3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H1fooQ8VIK3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H1fooQ8VIK3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H1fooQ8VIK3 Haglr-201ENSMUST00000100000 2085 ntBASIC13.99□□□□□ -0.17
H1fooQ8VIK3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
H1fooQ8VIK3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H1fooQ8VIK3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
H1fooQ8VIK3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H1fooQ8VIK3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H1fooQ8VIK3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
H1fooQ8VIK3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H1fooQ8VIK3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.98□□□□□ -0.17
H1fooQ8VIK3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H1fooQ8VIK3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
H1fooQ8VIK3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
H1fooQ8VIK3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H1fooQ8VIK3 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.98□□□□□ -0.17
H1fooQ8VIK3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H1fooQ8VIK3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H1fooQ8VIK3 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.98□□□□□ -0.17
H1fooQ8VIK3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
H1fooQ8VIK3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H1fooQ8VIK3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H1fooQ8VIK3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
H1fooQ8VIK3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H1fooQ8VIK3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
H1fooQ8VIK3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
H1fooQ8VIK3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
H1fooQ8VIK3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
H1fooQ8VIK3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
H1fooQ8VIK3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H1fooQ8VIK3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms