Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg4Q8VHY0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cspg4Q8VHY0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cspg4Q8VHY0 Gm7230-201ENSMUST00000173026 815 ntBASIC14.33□□□□□ -0.11
Cspg4Q8VHY0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.33□□□□□ -0.11
Cspg4Q8VHY0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cspg4Q8VHY0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.33□□□□□ -0.11
Cspg4Q8VHY0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cspg4Q8VHY0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cspg4Q8VHY0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg4Q8VHY0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cspg4Q8VHY0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg4Q8VHY0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg4Q8VHY0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg4Q8VHY0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cspg4Q8VHY0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg4Q8VHY0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg4Q8VHY0 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.33□□□□□ -0.12
Cspg4Q8VHY0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cspg4Q8VHY0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg4Q8VHY0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cspg4Q8VHY0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg4Q8VHY0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Gm20949-201ENSMUST00000206478 952 ntBASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Gm6089-201ENSMUST00000197666 938 ntBASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms