Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 Gm44872-201ENSMUST00000207864 420 ntBASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lmcd1Q8VEE1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lmcd1Q8VEE1 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lmcd1Q8VEE1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lmcd1Q8VEE1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.79■□□□□ 0.44
Lmcd1Q8VEE1 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lmcd1Q8VEE1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lmcd1Q8VEE1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Lmcd1Q8VEE1 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Lmcd1Q8VEE1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lmcd1Q8VEE1 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.79■□□□□ 0.44
Lmcd1Q8VEE1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lmcd1Q8VEE1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lmcd1Q8VEE1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lmcd1Q8VEE1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lmcd1Q8VEE1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lmcd1Q8VEE1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Lmcd1Q8VEE1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lmcd1Q8VEE1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lmcd1Q8VEE1 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.78■□□□□ 0.44
Lmcd1Q8VEE1 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.78■□□□□ 0.44
Lmcd1Q8VEE1 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lmcd1Q8VEE1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lmcd1Q8VEE1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lmcd1Q8VEE1 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.78■□□□□ 0.44
Lmcd1Q8VEE1 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.78■□□□□ 0.44
Lmcd1Q8VEE1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lmcd1Q8VEE1 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lmcd1Q8VEE1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lmcd1Q8VEE1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lmcd1Q8VEE1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lmcd1Q8VEE1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lmcd1Q8VEE1 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.77■□□□□ 0.44
Lmcd1Q8VEE1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lmcd1Q8VEE1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lmcd1Q8VEE1 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lmcd1Q8VEE1 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.77■□□□□ 0.44
Lmcd1Q8VEE1 Gm11025-201ENSMUST00000140773 466 ntBASIC17.77■□□□□ 0.44
Lmcd1Q8VEE1 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Lmcd1Q8VEE1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.77■□□□□ 0.44
Lmcd1Q8VEE1 Mir8117-201ENSMUST00000184773 107 ntBASIC17.77■□□□□ 0.44
Lmcd1Q8VEE1 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.77■□□□□ 0.44
Lmcd1Q8VEE1 Chchd1-203ENSMUST00000224633 557 ntBASIC17.77■□□□□ 0.44
Lmcd1Q8VEE1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lmcd1Q8VEE1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lmcd1Q8VEE1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lmcd1Q8VEE1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lmcd1Q8VEE1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Lmcd1Q8VEE1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lmcd1Q8VEE1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Lmcd1Q8VEE1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lmcd1Q8VEE1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lmcd1Q8VEE1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lmcd1Q8VEE1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lmcd1Q8VEE1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lmcd1Q8VEE1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lmcd1Q8VEE1 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.76■□□□□ 0.43
Lmcd1Q8VEE1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lmcd1Q8VEE1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.76■□□□□ 0.43
Lmcd1Q8VEE1 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lmcd1Q8VEE1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lmcd1Q8VEE1 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.76■□□□□ 0.43
Lmcd1Q8VEE1 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lmcd1Q8VEE1 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.76■□□□□ 0.43
Lmcd1Q8VEE1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lmcd1Q8VEE1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lmcd1Q8VEE1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Lmcd1Q8VEE1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.76■□□□□ 0.43
Lmcd1Q8VEE1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lmcd1Q8VEE1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.75■□□□□ 0.43
Lmcd1Q8VEE1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lmcd1Q8VEE1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lmcd1Q8VEE1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lmcd1Q8VEE1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Lmcd1Q8VEE1 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.75■□□□□ 0.43
Lmcd1Q8VEE1 Mir3113-201ENSMUST00000175478 76 ntBASIC17.75■□□□□ 0.43
Lmcd1Q8VEE1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lmcd1Q8VEE1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
Lmcd1Q8VEE1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms