Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uhrf1Q8VDF2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uhrf1Q8VDF2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uhrf1Q8VDF2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uhrf1Q8VDF2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uhrf1Q8VDF2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uhrf1Q8VDF2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Uhrf1Q8VDF2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uhrf1Q8VDF2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uhrf1Q8VDF2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uhrf1Q8VDF2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Uhrf1Q8VDF2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.21■□□□□ 0.35
Uhrf1Q8VDF2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.21■□□□□ 0.35
Uhrf1Q8VDF2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Uhrf1Q8VDF2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uhrf1Q8VDF2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uhrf1Q8VDF2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uhrf1Q8VDF2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.21■□□□□ 0.35
Uhrf1Q8VDF2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Uhrf1Q8VDF2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Uhrf1Q8VDF2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Uhrf1Q8VDF2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Uhrf1Q8VDF2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 Mir5126-201ENSMUST00000175513 77 ntBASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Uhrf1Q8VDF2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Uhrf1Q8VDF2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Uhrf1Q8VDF2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Uhrf1Q8VDF2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
Uhrf1Q8VDF2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Uhrf1Q8VDF2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.19■□□□□ 0.34
Uhrf1Q8VDF2 Gm5364-201ENSMUST00000216789 889 ntBASIC17.19■□□□□ 0.34
Uhrf1Q8VDF2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Uhrf1Q8VDF2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.19■□□□□ 0.34
Uhrf1Q8VDF2 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Uhrf1Q8VDF2 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.19■□□□□ 0.34
Uhrf1Q8VDF2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Uhrf1Q8VDF2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Uhrf1Q8VDF2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.19■□□□□ 0.34
Uhrf1Q8VDF2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Uhrf1Q8VDF2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Uhrf1Q8VDF2 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.18■□□□□ 0.34
Uhrf1Q8VDF2 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.18■□□□□ 0.34
Uhrf1Q8VDF2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Uhrf1Q8VDF2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Uhrf1Q8VDF2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
Uhrf1Q8VDF2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Uhrf1Q8VDF2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Uhrf1Q8VDF2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Uhrf1Q8VDF2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Uhrf1Q8VDF2 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.18■□□□□ 0.34
Uhrf1Q8VDF2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Uhrf1Q8VDF2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Uhrf1Q8VDF2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Uhrf1Q8VDF2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Uhrf1Q8VDF2 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.18■□□□□ 0.34
Uhrf1Q8VDF2 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Uhrf1Q8VDF2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Uhrf1Q8VDF2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Uhrf1Q8VDF2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Uhrf1Q8VDF2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Uhrf1Q8VDF2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Uhrf1Q8VDF2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Uhrf1Q8VDF2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Uhrf1Q8VDF2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Uhrf1Q8VDF2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Uhrf1Q8VDF2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.17■□□□□ 0.34
Uhrf1Q8VDF2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Uhrf1Q8VDF2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.17■□□□□ 0.34
Uhrf1Q8VDF2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Uhrf1Q8VDF2 Gm11594-201ENSMUST00000122313 162 ntBASIC17.17■□□□□ 0.34
Uhrf1Q8VDF2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Uhrf1Q8VDF2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.17■□□□□ 0.34
Uhrf1Q8VDF2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Uhrf1Q8VDF2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Uhrf1Q8VDF2 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Uhrf1Q8VDF2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Uhrf1Q8VDF2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms