Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp33Q8R5K2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp33Q8R5K2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp33Q8R5K2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp33Q8R5K2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp33Q8R5K2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp33Q8R5K2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp33Q8R5K2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp33Q8R5K2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.2■□□□□ 0.66
Usp33Q8R5K2 Gm27867-201ENSMUST00000184778 125 ntBASIC19.2■□□□□ 0.66
Usp33Q8R5K2 Gm44450-201ENSMUST00000199528 114 ntBASIC19.2■□□□□ 0.66
Usp33Q8R5K2 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.2■□□□□ 0.66
Usp33Q8R5K2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp33Q8R5K2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp33Q8R5K2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp33Q8R5K2 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.2■□□□□ 0.66
Usp33Q8R5K2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp33Q8R5K2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Usp33Q8R5K2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Usp33Q8R5K2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.2■□□□□ 0.66
Usp33Q8R5K2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp33Q8R5K2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp33Q8R5K2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp33Q8R5K2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp33Q8R5K2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp33Q8R5K2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp33Q8R5K2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp33Q8R5K2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp33Q8R5K2 Rprl3-201ENSMUST00000157400 290 ntBASIC19.19■□□□□ 0.66
Usp33Q8R5K2 Gm37935-201ENSMUST00000192012 982 ntBASIC19.19■□□□□ 0.66
Usp33Q8R5K2 Gm29707-201ENSMUST00000196325 491 ntBASIC19.19■□□□□ 0.66
Usp33Q8R5K2 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.19■□□□□ 0.66
Usp33Q8R5K2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Usp33Q8R5K2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp33Q8R5K2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp33Q8R5K2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Usp33Q8R5K2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp33Q8R5K2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp33Q8R5K2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp33Q8R5K2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.19■□□□□ 0.66
Usp33Q8R5K2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp33Q8R5K2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp33Q8R5K2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp33Q8R5K2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp33Q8R5K2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp33Q8R5K2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.18■□□□□ 0.66
Usp33Q8R5K2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp33Q8R5K2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp33Q8R5K2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.18■□□□□ 0.66
Usp33Q8R5K2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp33Q8R5K2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp33Q8R5K2 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp33Q8R5K2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp33Q8R5K2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp33Q8R5K2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp33Q8R5K2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp33Q8R5K2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.18■□□□□ 0.66
Usp33Q8R5K2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp33Q8R5K2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Usp33Q8R5K2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Usp33Q8R5K2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp33Q8R5K2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
Usp33Q8R5K2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Usp33Q8R5K2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp33Q8R5K2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp33Q8R5K2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp33Q8R5K2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp33Q8R5K2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp33Q8R5K2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp33Q8R5K2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp33Q8R5K2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp33Q8R5K2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.17■□□□□ 0.66
Usp33Q8R5K2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp33Q8R5K2 Gm6296-201ENSMUST00000222599 943 ntBASIC19.17■□□□□ 0.66
Usp33Q8R5K2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp33Q8R5K2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp33Q8R5K2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Usp33Q8R5K2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp33Q8R5K2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp33Q8R5K2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp33Q8R5K2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.17■□□□□ 0.66
Usp33Q8R5K2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp33Q8R5K2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp33Q8R5K2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp33Q8R5K2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp33Q8R5K2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp33Q8R5K2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp33Q8R5K2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.16■□□□□ 0.66
Usp33Q8R5K2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.16■□□□□ 0.66
Usp33Q8R5K2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Usp33Q8R5K2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp33Q8R5K2 Mir5131-201ENSMUST00000175426 93 ntBASIC19.16■□□□□ 0.66
Usp33Q8R5K2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp33Q8R5K2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp33Q8R5K2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp33Q8R5K2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp33Q8R5K2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Usp33Q8R5K2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp33Q8R5K2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp33Q8R5K2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms