Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 Gm8969-201ENSMUST00000199694 526 ntBASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cuedc1Q8R3V6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Gm6443-201ENSMUST00000203599 874 ntBASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Mzt1-203ENSMUST00000227948 952 ntBASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cuedc1Q8R3V6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 Gm18115-201ENSMUST00000221209 621 ntBASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 Il3ra-202ENSMUST00000223589 738 ntBASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cuedc1Q8R3V6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cuedc1Q8R3V6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cuedc1Q8R3V6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cuedc1Q8R3V6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cuedc1Q8R3V6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cuedc1Q8R3V6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cuedc1Q8R3V6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cuedc1Q8R3V6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cuedc1Q8R3V6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Cuedc1Q8R3V6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.16■□□□□ 0.02
Cuedc1Q8R3V6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.16■□□□□ 0.02
Cuedc1Q8R3V6 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.16■□□□□ 0.02
Cuedc1Q8R3V6 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.16■□□□□ 0.02
Cuedc1Q8R3V6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cuedc1Q8R3V6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cuedc1Q8R3V6 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cuedc1Q8R3V6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cuedc1Q8R3V6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.16■□□□□ 0.02
Cuedc1Q8R3V6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms