Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vopp1Q8R1C3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vopp1Q8R1C3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.71■□□□□ 0.43
Vopp1Q8R1C3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.71■□□□□ 0.43
Vopp1Q8R1C3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vopp1Q8R1C3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.71■□□□□ 0.43
Vopp1Q8R1C3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vopp1Q8R1C3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vopp1Q8R1C3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vopp1Q8R1C3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vopp1Q8R1C3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vopp1Q8R1C3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vopp1Q8R1C3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vopp1Q8R1C3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Vopp1Q8R1C3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vopp1Q8R1C3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vopp1Q8R1C3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Vopp1Q8R1C3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vopp1Q8R1C3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vopp1Q8R1C3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vopp1Q8R1C3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vopp1Q8R1C3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vopp1Q8R1C3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vopp1Q8R1C3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vopp1Q8R1C3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vopp1Q8R1C3 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.69■□□□□ 0.42
Vopp1Q8R1C3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vopp1Q8R1C3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vopp1Q8R1C3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.69■□□□□ 0.42
Vopp1Q8R1C3 Gm7862-201ENSMUST00000121461 292 ntBASIC17.69■□□□□ 0.42
Vopp1Q8R1C3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.69■□□□□ 0.42
Vopp1Q8R1C3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.69■□□□□ 0.42
Vopp1Q8R1C3 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.69■□□□□ 0.42
Vopp1Q8R1C3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vopp1Q8R1C3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Vopp1Q8R1C3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vopp1Q8R1C3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Vopp1Q8R1C3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vopp1Q8R1C3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Vopp1Q8R1C3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vopp1Q8R1C3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vopp1Q8R1C3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vopp1Q8R1C3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vopp1Q8R1C3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vopp1Q8R1C3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vopp1Q8R1C3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Vopp1Q8R1C3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vopp1Q8R1C3 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vopp1Q8R1C3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vopp1Q8R1C3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vopp1Q8R1C3 Rps4l-201ENSMUST00000071745 943 ntBASIC17.68■□□□□ 0.42
Vopp1Q8R1C3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vopp1Q8R1C3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Vopp1Q8R1C3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vopp1Q8R1C3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vopp1Q8R1C3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vopp1Q8R1C3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vopp1Q8R1C3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vopp1Q8R1C3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vopp1Q8R1C3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vopp1Q8R1C3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vopp1Q8R1C3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.67■□□□□ 0.42
Vopp1Q8R1C3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vopp1Q8R1C3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Vopp1Q8R1C3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vopp1Q8R1C3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vopp1Q8R1C3 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.67■□□□□ 0.42
Vopp1Q8R1C3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.67■□□□□ 0.42
Vopp1Q8R1C3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.67■□□□□ 0.42
Vopp1Q8R1C3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Vopp1Q8R1C3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vopp1Q8R1C3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vopp1Q8R1C3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vopp1Q8R1C3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vopp1Q8R1C3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vopp1Q8R1C3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vopp1Q8R1C3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vopp1Q8R1C3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms