Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ebf4Q8K4J2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf4Q8K4J2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf4Q8K4J2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Ebf4Q8K4J2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf4Q8K4J2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.3■□□□□ 0.04
Ebf4Q8K4J2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Ebf4Q8K4J2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf4Q8K4J2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf4Q8K4J2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf4Q8K4J2 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf4Q8K4J2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf4Q8K4J2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf4Q8K4J2 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf4Q8K4J2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.29■□□□□ 0.04
Ebf4Q8K4J2 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.28■□□□□ 0.04
Ebf4Q8K4J2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf4Q8K4J2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf4Q8K4J2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf4Q8K4J2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ebf4Q8K4J2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf4Q8K4J2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf4Q8K4J2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf4Q8K4J2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf4Q8K4J2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.28■□□□□ 0.04
Ebf4Q8K4J2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf4Q8K4J2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Ebf4Q8K4J2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.28■□□□□ 0.04
Ebf4Q8K4J2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.28■□□□□ 0.04
Ebf4Q8K4J2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf4Q8K4J2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf4Q8K4J2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf4Q8K4J2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf4Q8K4J2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf4Q8K4J2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf4Q8K4J2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf4Q8K4J2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf4Q8K4J2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf4Q8K4J2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf4Q8K4J2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.27■□□□□ 0.04
Ebf4Q8K4J2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.27■□□□□ 0.04
Ebf4Q8K4J2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf4Q8K4J2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ebf4Q8K4J2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf4Q8K4J2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Ebf4Q8K4J2 Gm2399-201ENSMUST00000104944 225 ntBASIC15.27■□□□□ 0.04
Ebf4Q8K4J2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf4Q8K4J2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf4Q8K4J2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.27■□□□□ 0.04
Ebf4Q8K4J2 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.27■□□□□ 0.04
Ebf4Q8K4J2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf4Q8K4J2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.27■□□□□ 0.04
Ebf4Q8K4J2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ebf4Q8K4J2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ebf4Q8K4J2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Ebf4Q8K4J2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ebf4Q8K4J2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ebf4Q8K4J2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ebf4Q8K4J2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ebf4Q8K4J2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf4Q8K4J2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms