Protein–RNA interactions for Protein: Q8K3D3

Swi5, DNA repair protein SWI5 homolog, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swi5Q8K3D3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Swi5Q8K3D3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Swi5Q8K3D3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Swi5Q8K3D3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Swi5Q8K3D3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Swi5Q8K3D3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Swi5Q8K3D3 Gm2399-201ENSMUST00000104944 225 ntBASIC15.24■□□□□ 0.03
Swi5Q8K3D3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Swi5Q8K3D3 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.24■□□□□ 0.03
Swi5Q8K3D3 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.24■□□□□ 0.03
Swi5Q8K3D3 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.24■□□□□ 0.03
Swi5Q8K3D3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Swi5Q8K3D3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.24■□□□□ 0.03
Swi5Q8K3D3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Swi5Q8K3D3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Swi5Q8K3D3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Swi5Q8K3D3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Swi5Q8K3D3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Swi5Q8K3D3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Swi5Q8K3D3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Swi5Q8K3D3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Swi5Q8K3D3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Swi5Q8K3D3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Swi5Q8K3D3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Swi5Q8K3D3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Swi5Q8K3D3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Swi5Q8K3D3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Swi5Q8K3D3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Swi5Q8K3D3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Swi5Q8K3D3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Swi5Q8K3D3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Swi5Q8K3D3 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Swi5Q8K3D3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Swi5Q8K3D3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Swi5Q8K3D3 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Swi5Q8K3D3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Swi5Q8K3D3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Swi5Q8K3D3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.23■□□□□ 0.03
Swi5Q8K3D3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Swi5Q8K3D3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Swi5Q8K3D3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Swi5Q8K3D3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Swi5Q8K3D3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Swi5Q8K3D3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Swi5Q8K3D3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Swi5Q8K3D3 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Swi5Q8K3D3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Swi5Q8K3D3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Swi5Q8K3D3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Swi5Q8K3D3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Swi5Q8K3D3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Swi5Q8K3D3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.22■□□□□ 0.03
Swi5Q8K3D3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Swi5Q8K3D3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Swi5Q8K3D3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.22■□□□□ 0.03
Swi5Q8K3D3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Swi5Q8K3D3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Swi5Q8K3D3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Swi5Q8K3D3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Swi5Q8K3D3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Swi5Q8K3D3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Swi5Q8K3D3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Swi5Q8K3D3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Swi5Q8K3D3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Swi5Q8K3D3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.22■□□□□ 0.03
Swi5Q8K3D3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.21■□□□□ 0.03
Swi5Q8K3D3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Swi5Q8K3D3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Swi5Q8K3D3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Swi5Q8K3D3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Swi5Q8K3D3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Swi5Q8K3D3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Swi5Q8K3D3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Swi5Q8K3D3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Swi5Q8K3D3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Swi5Q8K3D3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Swi5Q8K3D3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Swi5Q8K3D3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Swi5Q8K3D3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Swi5Q8K3D3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Swi5Q8K3D3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Swi5Q8K3D3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Swi5Q8K3D3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.21■□□□□ 0.03
Swi5Q8K3D3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Swi5Q8K3D3 Zfp783-201ENSMUST00000095946 670 ntBASIC15.21■□□□□ 0.03
Swi5Q8K3D3 Gm10493-201ENSMUST00000097270 612 ntBASIC15.21■□□□□ 0.03
Swi5Q8K3D3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Swi5Q8K3D3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Swi5Q8K3D3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Swi5Q8K3D3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Swi5Q8K3D3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Swi5Q8K3D3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Swi5Q8K3D3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Swi5Q8K3D3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Swi5Q8K3D3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Swi5Q8K3D3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Swi5Q8K3D3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.2■□□□□ 0.02
Swi5Q8K3D3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Swi5Q8K3D3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Swi5Q8K3D3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms