Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC10.53□□□□□ -0.72
Cystm1Q8K353 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC10.53□□□□□ -0.72
Cystm1Q8K353 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Cystm1Q8K353 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Cystm1Q8K353 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cystm1Q8K353 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cystm1Q8K353 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
Cystm1Q8K353 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cystm1Q8K353 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cystm1Q8K353 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cystm1Q8K353 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cystm1Q8K353 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cystm1Q8K353 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.72
Cystm1Q8K353 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.72
Cystm1Q8K353 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cystm1Q8K353 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cystm1Q8K353 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC10.52□□□□□ -0.73
Cystm1Q8K353 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Cystm1Q8K353 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Rab3c-203ENSMUST00000224180 967 ntBASIC10.52□□□□□ -0.73
Cystm1Q8K353 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Gm45133-201ENSMUST00000207548 2773 ntBASIC10.52□□□□□ -0.73
Cystm1Q8K353 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cystm1Q8K353 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Cystm1Q8K353 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cystm1Q8K353 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cystm1Q8K353 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC10.51□□□□□ -0.73
Cystm1Q8K353 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Cystm1Q8K353 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cystm1Q8K353 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms