Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trnt1Q8K1J6 Gm13559-201ENSMUST00000120476 863 ntBASIC16.18■□□□□ 0.18
Trnt1Q8K1J6 Gm16061-201ENSMUST00000122167 857 ntBASIC16.18■□□□□ 0.18
Trnt1Q8K1J6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trnt1Q8K1J6 Gm13474-201ENSMUST00000122466 815 ntBASIC16.18■□□□□ 0.18
Trnt1Q8K1J6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trnt1Q8K1J6 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trnt1Q8K1J6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trnt1Q8K1J6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trnt1Q8K1J6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trnt1Q8K1J6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trnt1Q8K1J6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trnt1Q8K1J6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trnt1Q8K1J6 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.18■□□□□ 0.18
Trnt1Q8K1J6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trnt1Q8K1J6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.18■□□□□ 0.18
Trnt1Q8K1J6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trnt1Q8K1J6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trnt1Q8K1J6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trnt1Q8K1J6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trnt1Q8K1J6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.17■□□□□ 0.18
Trnt1Q8K1J6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Trnt1Q8K1J6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trnt1Q8K1J6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trnt1Q8K1J6 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trnt1Q8K1J6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.17■□□□□ 0.18
Trnt1Q8K1J6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trnt1Q8K1J6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trnt1Q8K1J6 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trnt1Q8K1J6 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trnt1Q8K1J6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.17■□□□□ 0.18
Trnt1Q8K1J6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trnt1Q8K1J6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trnt1Q8K1J6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trnt1Q8K1J6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trnt1Q8K1J6 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trnt1Q8K1J6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trnt1Q8K1J6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trnt1Q8K1J6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trnt1Q8K1J6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.16■□□□□ 0.18
Trnt1Q8K1J6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnt1Q8K1J6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnt1Q8K1J6 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnt1Q8K1J6 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.16■□□□□ 0.18
Trnt1Q8K1J6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trnt1Q8K1J6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnt1Q8K1J6 Gm13186-201ENSMUST00000118031 316 ntBASIC16.16■□□□□ 0.18
Trnt1Q8K1J6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.16■□□□□ 0.18
Trnt1Q8K1J6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trnt1Q8K1J6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.16■□□□□ 0.18
Trnt1Q8K1J6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnt1Q8K1J6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnt1Q8K1J6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnt1Q8K1J6 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.16■□□□□ 0.18
Trnt1Q8K1J6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnt1Q8K1J6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trnt1Q8K1J6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.16■□□□□ 0.18
Trnt1Q8K1J6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnt1Q8K1J6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnt1Q8K1J6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnt1Q8K1J6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Trnt1Q8K1J6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnt1Q8K1J6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnt1Q8K1J6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnt1Q8K1J6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trnt1Q8K1J6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnt1Q8K1J6 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnt1Q8K1J6 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.15■□□□□ 0.18
Trnt1Q8K1J6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnt1Q8K1J6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trnt1Q8K1J6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnt1Q8K1J6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnt1Q8K1J6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnt1Q8K1J6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnt1Q8K1J6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnt1Q8K1J6 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.15■□□□□ 0.18
Trnt1Q8K1J6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trnt1Q8K1J6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Trnt1Q8K1J6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.14■□□□□ 0.18
Trnt1Q8K1J6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trnt1Q8K1J6 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Trnt1Q8K1J6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trnt1Q8K1J6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trnt1Q8K1J6 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trnt1Q8K1J6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.14■□□□□ 0.17
Trnt1Q8K1J6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trnt1Q8K1J6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.14■□□□□ 0.17
Trnt1Q8K1J6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.14■□□□□ 0.17
Trnt1Q8K1J6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.14■□□□□ 0.17
Trnt1Q8K1J6 Gm10252-201ENSMUST00000209541 832 ntBASIC16.14■□□□□ 0.17
Trnt1Q8K1J6 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.14■□□□□ 0.17
Trnt1Q8K1J6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trnt1Q8K1J6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trnt1Q8K1J6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trnt1Q8K1J6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trnt1Q8K1J6 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trnt1Q8K1J6 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trnt1Q8K1J6 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trnt1Q8K1J6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trnt1Q8K1J6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms