Protein–RNA interactions for Protein: Q8K0H1

Slc47a1, Multidrug and toxin extrusion protein 1, mousemouse

Predictions only

Length 567 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc47a1Q8K0H1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc47a1Q8K0H1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.53■□□□□ 0.24
Slc47a1Q8K0H1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc47a1Q8K0H1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc47a1Q8K0H1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc47a1Q8K0H1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc47a1Q8K0H1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc47a1Q8K0H1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Slc47a1Q8K0H1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc47a1Q8K0H1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc47a1Q8K0H1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc47a1Q8K0H1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Slc47a1Q8K0H1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.52■□□□□ 0.24
Slc47a1Q8K0H1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc47a1Q8K0H1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc47a1Q8K0H1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Slc47a1Q8K0H1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc47a1Q8K0H1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc47a1Q8K0H1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc47a1Q8K0H1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Slc47a1Q8K0H1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc47a1Q8K0H1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.52■□□□□ 0.24
Slc47a1Q8K0H1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.52■□□□□ 0.24
Slc47a1Q8K0H1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc47a1Q8K0H1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc47a1Q8K0H1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc47a1Q8K0H1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc47a1Q8K0H1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc47a1Q8K0H1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.52■□□□□ 0.23
Slc47a1Q8K0H1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc47a1Q8K0H1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.52■□□□□ 0.23
Slc47a1Q8K0H1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Slc47a1Q8K0H1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc47a1Q8K0H1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.52■□□□□ 0.23
Slc47a1Q8K0H1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.52■□□□□ 0.23
Slc47a1Q8K0H1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Slc47a1Q8K0H1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Slc47a1Q8K0H1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc47a1Q8K0H1 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc47a1Q8K0H1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc47a1Q8K0H1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc47a1Q8K0H1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc47a1Q8K0H1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.51■□□□□ 0.23
Slc47a1Q8K0H1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc47a1Q8K0H1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc47a1Q8K0H1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.51■□□□□ 0.23
Slc47a1Q8K0H1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Slc47a1Q8K0H1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Slc47a1Q8K0H1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc47a1Q8K0H1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Slc47a1Q8K0H1 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc47a1Q8K0H1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc47a1Q8K0H1 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Slc47a1Q8K0H1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc47a1Q8K0H1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc47a1Q8K0H1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Slc47a1Q8K0H1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc47a1Q8K0H1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc47a1Q8K0H1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc47a1Q8K0H1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc47a1Q8K0H1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc47a1Q8K0H1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Slc47a1Q8K0H1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc47a1Q8K0H1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc47a1Q8K0H1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slc47a1Q8K0H1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc47a1Q8K0H1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Slc47a1Q8K0H1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Slc47a1Q8K0H1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc47a1Q8K0H1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Slc47a1Q8K0H1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Slc47a1Q8K0H1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.5■□□□□ 0.23
Slc47a1Q8K0H1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slc47a1Q8K0H1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc47a1Q8K0H1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc47a1Q8K0H1 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.5■□□□□ 0.23
Slc47a1Q8K0H1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc47a1Q8K0H1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc47a1Q8K0H1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc47a1Q8K0H1 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.49■□□□□ 0.23
Slc47a1Q8K0H1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Slc47a1Q8K0H1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Slc47a1Q8K0H1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc47a1Q8K0H1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc47a1Q8K0H1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.49■□□□□ 0.23
Slc47a1Q8K0H1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc47a1Q8K0H1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc47a1Q8K0H1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc47a1Q8K0H1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.49■□□□□ 0.23
Slc47a1Q8K0H1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc47a1Q8K0H1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc47a1Q8K0H1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc47a1Q8K0H1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc47a1Q8K0H1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.48■□□□□ 0.23
Slc47a1Q8K0H1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc47a1Q8K0H1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.48■□□□□ 0.23
Slc47a1Q8K0H1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc47a1Q8K0H1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Slc47a1Q8K0H1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Slc47a1Q8K0H1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms