Protein–RNA interactions for Protein: Q8K099

Lrit1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrit1Q8K099 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lrit1Q8K099 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lrit1Q8K099 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lrit1Q8K099 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Lrit1Q8K099 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lrit1Q8K099 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lrit1Q8K099 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrit1Q8K099 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrit1Q8K099 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Lrit1Q8K099 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrit1Q8K099 Gm11025-201ENSMUST00000140773 466 ntBASIC20.91■□□□□ 0.94
Lrit1Q8K099 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrit1Q8K099 Mir6956-201ENSMUST00000183598 62 ntBASIC20.91■□□□□ 0.94
Lrit1Q8K099 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.91■□□□□ 0.94
Lrit1Q8K099 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC20.91■□□□□ 0.94
Lrit1Q8K099 Gm7229-201ENSMUST00000214719 1007 ntBASIC20.91■□□□□ 0.94
Lrit1Q8K099 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrit1Q8K099 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Lrit1Q8K099 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrit1Q8K099 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrit1Q8K099 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC20.91■□□□□ 0.94
Lrit1Q8K099 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrit1Q8K099 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrit1Q8K099 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrit1Q8K099 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Lrit1Q8K099 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrit1Q8K099 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrit1Q8K099 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrit1Q8K099 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lrit1Q8K099 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Lrit1Q8K099 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrit1Q8K099 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrit1Q8K099 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC20.9■□□□□ 0.94
Lrit1Q8K099 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lrit1Q8K099 AC139382.1-201ENSMUST00000221402 498 ntBASIC20.9■□□□□ 0.94
Lrit1Q8K099 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.9■□□□□ 0.94
Lrit1Q8K099 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrit1Q8K099 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrit1Q8K099 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrit1Q8K099 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lrit1Q8K099 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lrit1Q8K099 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrit1Q8K099 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Lrit1Q8K099 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Lrit1Q8K099 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Lrit1Q8K099 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Lrit1Q8K099 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Lrit1Q8K099 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Lrit1Q8K099 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lrit1Q8K099 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Lrit1Q8K099 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Lrit1Q8K099 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC20.89■□□□□ 0.93
Lrit1Q8K099 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC20.89■□□□□ 0.93
Lrit1Q8K099 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Lrit1Q8K099 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
Lrit1Q8K099 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lrit1Q8K099 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lrit1Q8K099 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Lrit1Q8K099 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.89■□□□□ 0.93
Lrit1Q8K099 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lrit1Q8K099 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lrit1Q8K099 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lrit1Q8K099 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lrit1Q8K099 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Lrit1Q8K099 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lrit1Q8K099 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Lrit1Q8K099 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lrit1Q8K099 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lrit1Q8K099 Gm11873-201ENSMUST00000117877 1304 ntBASIC20.88■□□□□ 0.93
Lrit1Q8K099 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lrit1Q8K099 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC20.88■□□□□ 0.93
Lrit1Q8K099 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Lrit1Q8K099 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Lrit1Q8K099 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lrit1Q8K099 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Lrit1Q8K099 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lrit1Q8K099 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.88■□□□□ 0.93
Lrit1Q8K099 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lrit1Q8K099 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Lrit1Q8K099 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lrit1Q8K099 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Lrit1Q8K099 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lrit1Q8K099 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lrit1Q8K099 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.87■□□□□ 0.93
Lrit1Q8K099 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC20.87■□□□□ 0.93
Lrit1Q8K099 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.87■□□□□ 0.93
Lrit1Q8K099 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Lrit1Q8K099 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC20.87■□□□□ 0.93
Lrit1Q8K099 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Lrit1Q8K099 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC20.87■□□□□ 0.93
Lrit1Q8K099 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Lrit1Q8K099 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lrit1Q8K099 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lrit1Q8K099 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lrit1Q8K099 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lrit1Q8K099 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.87■□□□□ 0.93
Lrit1Q8K099 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lrit1Q8K099 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lrit1Q8K099 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lrit1Q8K099 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms