Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgcll1Q8JZS7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgcll1Q8JZS7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Hmgcll1Q8JZS7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgcll1Q8JZS7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgcll1Q8JZS7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Hmgcll1Q8JZS7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hmgcll1Q8JZS7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgcll1Q8JZS7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Hmgcll1Q8JZS7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgcll1Q8JZS7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgcll1Q8JZS7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgcll1Q8JZS7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgcll1Q8JZS7 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Hmgcll1Q8JZS7 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgcll1Q8JZS7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.2■□□□□ 0.34
Hmgcll1Q8JZS7 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Hmgcll1Q8JZS7 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgcll1Q8JZS7 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Hmgcll1Q8JZS7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Hmgcll1Q8JZS7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgcll1Q8JZS7 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.2■□□□□ 0.34
Hmgcll1Q8JZS7 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgcll1Q8JZS7 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgcll1Q8JZS7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgcll1Q8JZS7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcll1Q8JZS7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgcll1Q8JZS7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgcll1Q8JZS7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.18■□□□□ 0.34
Hmgcll1Q8JZS7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgcll1Q8JZS7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgcll1Q8JZS7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgcll1Q8JZS7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.18■□□□□ 0.34
Hmgcll1Q8JZS7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgcll1Q8JZS7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hmgcll1Q8JZS7 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgcll1Q8JZS7 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.18■□□□□ 0.34
Hmgcll1Q8JZS7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.18■□□□□ 0.34
Hmgcll1Q8JZS7 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.18■□□□□ 0.34
Hmgcll1Q8JZS7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Hmgcll1Q8JZS7 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgcll1Q8JZS7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgcll1Q8JZS7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgcll1Q8JZS7 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgcll1Q8JZS7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgcll1Q8JZS7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgcll1Q8JZS7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgcll1Q8JZS7 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgcll1Q8JZS7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgcll1Q8JZS7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgcll1Q8JZS7 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.17■□□□□ 0.34
Hmgcll1Q8JZS7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgcll1Q8JZS7 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.17■□□□□ 0.34
Hmgcll1Q8JZS7 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgcll1Q8JZS7 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.17■□□□□ 0.34
Hmgcll1Q8JZS7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgcll1Q8JZS7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgcll1Q8JZS7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Hmgcll1Q8JZS7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgcll1Q8JZS7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgcll1Q8JZS7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hmgcll1Q8JZS7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgcll1Q8JZS7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgcll1Q8JZS7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Hmgcll1Q8JZS7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgcll1Q8JZS7 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgcll1Q8JZS7 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.16■□□□□ 0.34
Hmgcll1Q8JZS7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgcll1Q8JZS7 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.16■□□□□ 0.34
Hmgcll1Q8JZS7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Hmgcll1Q8JZS7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Hmgcll1Q8JZS7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgcll1Q8JZS7 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgcll1Q8JZS7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgcll1Q8JZS7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms