Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rbm28Q8CGC6 Gm17807-201ENSMUST00000186869 298 ntBASIC19.76■□□□□ 0.75
Rbm28Q8CGC6 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.76■□□□□ 0.75
Rbm28Q8CGC6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rbm28Q8CGC6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rbm28Q8CGC6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Rbm28Q8CGC6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.76■□□□□ 0.75
Rbm28Q8CGC6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rbm28Q8CGC6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rbm28Q8CGC6 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.76■□□□□ 0.75
Rbm28Q8CGC6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rbm28Q8CGC6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.75■□□□□ 0.75
Rbm28Q8CGC6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rbm28Q8CGC6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.75■□□□□ 0.75
Rbm28Q8CGC6 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rbm28Q8CGC6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rbm28Q8CGC6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rbm28Q8CGC6 Gm27000-201ENSMUST00000182943 842 ntBASIC19.75■□□□□ 0.75
Rbm28Q8CGC6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rbm28Q8CGC6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rbm28Q8CGC6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rbm28Q8CGC6 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rbm28Q8CGC6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rbm28Q8CGC6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rbm28Q8CGC6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rbm28Q8CGC6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rbm28Q8CGC6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rbm28Q8CGC6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rbm28Q8CGC6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Rbm28Q8CGC6 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rbm28Q8CGC6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Rbm28Q8CGC6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rbm28Q8CGC6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rbm28Q8CGC6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rbm28Q8CGC6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rbm28Q8CGC6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rbm28Q8CGC6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rbm28Q8CGC6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rbm28Q8CGC6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rbm28Q8CGC6 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rbm28Q8CGC6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rbm28Q8CGC6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Rbm28Q8CGC6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.74■□□□□ 0.75
Rbm28Q8CGC6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.74■□□□□ 0.75
Rbm28Q8CGC6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.74■□□□□ 0.75
Rbm28Q8CGC6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rbm28Q8CGC6 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rbm28Q8CGC6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rbm28Q8CGC6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Rbm28Q8CGC6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Rbm28Q8CGC6 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.74■□□□□ 0.75
Rbm28Q8CGC6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rbm28Q8CGC6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rbm28Q8CGC6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Rbm28Q8CGC6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rbm28Q8CGC6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rbm28Q8CGC6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.73■□□□□ 0.75
Rbm28Q8CGC6 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Rbm28Q8CGC6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
Rbm28Q8CGC6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rbm28Q8CGC6 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rbm28Q8CGC6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.73■□□□□ 0.75
Rbm28Q8CGC6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rbm28Q8CGC6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rbm28Q8CGC6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Rbm28Q8CGC6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rbm28Q8CGC6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rbm28Q8CGC6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.73■□□□□ 0.75
Rbm28Q8CGC6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rbm28Q8CGC6 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rbm28Q8CGC6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.72■□□□□ 0.75
Rbm28Q8CGC6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rbm28Q8CGC6 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rbm28Q8CGC6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rbm28Q8CGC6 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rbm28Q8CGC6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rbm28Q8CGC6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rbm28Q8CGC6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rbm28Q8CGC6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.72■□□□□ 0.75
Rbm28Q8CGC6 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rbm28Q8CGC6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.72■□□□□ 0.75
Rbm28Q8CGC6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rbm28Q8CGC6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rbm28Q8CGC6 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rbm28Q8CGC6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rbm28Q8CGC6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rbm28Q8CGC6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rbm28Q8CGC6 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Rbm28Q8CGC6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rbm28Q8CGC6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rbm28Q8CGC6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rbm28Q8CGC6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rbm28Q8CGC6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rbm28Q8CGC6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rbm28Q8CGC6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rbm28Q8CGC6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rbm28Q8CGC6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.71■□□□□ 0.75
Rbm28Q8CGC6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rbm28Q8CGC6 Gm28033-201ENSMUST00000184224 96 ntBASIC19.71■□□□□ 0.75
Rbm28Q8CGC6 Gm17971-201ENSMUST00000190239 806 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms