Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
ShfQ8CG80 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ShfQ8CG80 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
ShfQ8CG80 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ShfQ8CG80 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ShfQ8CG80 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.92□□□□□ -0.02
ShfQ8CG80 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ShfQ8CG80 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ShfQ8CG80 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ShfQ8CG80 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ShfQ8CG80 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ShfQ8CG80 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ShfQ8CG80 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ShfQ8CG80 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.91□□□□□ -0.02
ShfQ8CG80 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ShfQ8CG80 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ShfQ8CG80 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ShfQ8CG80 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
ShfQ8CG80 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ShfQ8CG80 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.91□□□□□ -0.02
ShfQ8CG80 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ShfQ8CG80 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ShfQ8CG80 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ShfQ8CG80 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ShfQ8CG80 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ShfQ8CG80 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
ShfQ8CG80 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ShfQ8CG80 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
ShfQ8CG80 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ShfQ8CG80 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ShfQ8CG80 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ShfQ8CG80 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ShfQ8CG80 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.91□□□□□ -0.02
ShfQ8CG80 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
ShfQ8CG80 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ShfQ8CG80 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ShfQ8CG80 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ShfQ8CG80 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ShfQ8CG80 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ShfQ8CG80 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ShfQ8CG80 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
ShfQ8CG80 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ShfQ8CG80 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ShfQ8CG80 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
ShfQ8CG80 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ShfQ8CG80 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.9□□□□□ -0.02
ShfQ8CG80 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
ShfQ8CG80 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.9□□□□□ -0.02
ShfQ8CG80 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ShfQ8CG80 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
ShfQ8CG80 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ShfQ8CG80 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ShfQ8CG80 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ShfQ8CG80 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ShfQ8CG80 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.9□□□□□ -0.02
ShfQ8CG80 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ShfQ8CG80 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ShfQ8CG80 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
ShfQ8CG80 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ShfQ8CG80 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ShfQ8CG80 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ShfQ8CG80 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ShfQ8CG80 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ShfQ8CG80 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ShfQ8CG80 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ShfQ8CG80 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ShfQ8CG80 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ShfQ8CG80 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ShfQ8CG80 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ShfQ8CG80 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ShfQ8CG80 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ShfQ8CG80 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ShfQ8CG80 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ShfQ8CG80 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.89□□□□□ -0.03
ShfQ8CG80 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ShfQ8CG80 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.89□□□□□ -0.03
ShfQ8CG80 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.89□□□□□ -0.03
ShfQ8CG80 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.89□□□□□ -0.03
ShfQ8CG80 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
ShfQ8CG80 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ShfQ8CG80 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ShfQ8CG80 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ShfQ8CG80 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ShfQ8CG80 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ShfQ8CG80 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ShfQ8CG80 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
ShfQ8CG80 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ShfQ8CG80 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ShfQ8CG80 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ShfQ8CG80 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ShfQ8CG80 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ShfQ8CG80 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ShfQ8CG80 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ShfQ8CG80 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ShfQ8CG80 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ShfQ8CG80 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ShfQ8CG80 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.88□□□□□ -0.03
ShfQ8CG80 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ShfQ8CG80 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ShfQ8CG80 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms