Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc4Q8CG47 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.61■□□□□ 0.89
Smc4Q8CG47 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smc4Q8CG47 Mir3081-201ENSMUST00000175305 84 ntBASIC20.61■□□□□ 0.89
Smc4Q8CG47 Gm27357-201ENSMUST00000183754 135 ntBASIC20.61■□□□□ 0.89
Smc4Q8CG47 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.61■□□□□ 0.89
Smc4Q8CG47 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc4Q8CG47 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.61■□□□□ 0.89
Smc4Q8CG47 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Smc4Q8CG47 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc4Q8CG47 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Smc4Q8CG47 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc4Q8CG47 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc4Q8CG47 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Smc4Q8CG47 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.6■□□□□ 0.89
Smc4Q8CG47 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc4Q8CG47 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.6■□□□□ 0.89
Smc4Q8CG47 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc4Q8CG47 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Smc4Q8CG47 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc4Q8CG47 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Smc4Q8CG47 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc4Q8CG47 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smc4Q8CG47 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.6■□□□□ 0.89
Smc4Q8CG47 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc4Q8CG47 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Smc4Q8CG47 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc4Q8CG47 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smc4Q8CG47 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smc4Q8CG47 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.59■□□□□ 0.89
Smc4Q8CG47 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc4Q8CG47 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smc4Q8CG47 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.59■□□□□ 0.89
Smc4Q8CG47 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smc4Q8CG47 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc4Q8CG47 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.59■□□□□ 0.89
Smc4Q8CG47 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc4Q8CG47 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.59■□□□□ 0.89
Smc4Q8CG47 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc4Q8CG47 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc4Q8CG47 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Smc4Q8CG47 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc4Q8CG47 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc4Q8CG47 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smc4Q8CG47 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc4Q8CG47 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Smc4Q8CG47 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc4Q8CG47 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Smc4Q8CG47 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc4Q8CG47 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Smc4Q8CG47 Gm15794-201ENSMUST00000120182 631 ntBASIC20.58■□□□□ 0.89
Smc4Q8CG47 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc4Q8CG47 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.58■□□□□ 0.89
Smc4Q8CG47 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc4Q8CG47 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Smc4Q8CG47 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Smc4Q8CG47 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc4Q8CG47 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Smc4Q8CG47 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smc4Q8CG47 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
Smc4Q8CG47 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smc4Q8CG47 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smc4Q8CG47 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smc4Q8CG47 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smc4Q8CG47 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Smc4Q8CG47 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smc4Q8CG47 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smc4Q8CG47 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smc4Q8CG47 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc4Q8CG47 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Smc4Q8CG47 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc4Q8CG47 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc4Q8CG47 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc4Q8CG47 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Smc4Q8CG47 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc4Q8CG47 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc4Q8CG47 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc4Q8CG47 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc4Q8CG47 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Smc4Q8CG47 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc4Q8CG47 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc4Q8CG47 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc4Q8CG47 Rarb-207ENSMUST00000225921 2756 ntBASIC20.57■□□□□ 0.88
Smc4Q8CG47 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc4Q8CG47 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc4Q8CG47 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc4Q8CG47 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc4Q8CG47 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc4Q8CG47 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Smc4Q8CG47 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc4Q8CG47 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smc4Q8CG47 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc4Q8CG47 AC125350.1-201ENSMUST00000225115 903 ntBASIC20.56■□□□□ 0.88
Smc4Q8CG47 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc4Q8CG47 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc4Q8CG47 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc4Q8CG47 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Smc4Q8CG47 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc4Q8CG47 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.56■□□□□ 0.88
Smc4Q8CG47 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms