Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.58■□□□□ 0.4
Q8CD60 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.58■□□□□ 0.4
Q8CD60 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.58■□□□□ 0.4
Q8CD60 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.58■□□□□ 0.4
Q8CD60 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.58■□□□□ 0.4
Q8CD60 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8CD60 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Q8CD60 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8CD60 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Q8CD60 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8CD60 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8CD60 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8CD60 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8CD60 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8CD60 Gm13836-201ENSMUST00000121159 501 ntBASIC17.57■□□□□ 0.4
Q8CD60 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8CD60 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Q8CD60 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.57■□□□□ 0.4
Q8CD60 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8CD60 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8CD60 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Q8CD60 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8CD60 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Q8CD60 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8CD60 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8CD60 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8CD60 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q8CD60 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Q8CD60 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.56■□□□□ 0.4
Q8CD60 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Q8CD60 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q8CD60 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.56■□□□□ 0.4
Q8CD60 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q8CD60 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q8CD60 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q8CD60 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.56■□□□□ 0.4
Q8CD60 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Q8CD60 Gm26039-201ENSMUST00000158152 144 ntBASIC17.56■□□□□ 0.4
Q8CD60 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Q8CD60 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.56■□□□□ 0.4
Q8CD60 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.56■□□□□ 0.4
Q8CD60 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Q8CD60 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Q8CD60 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q8CD60 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.56■□□□□ 0.4
Q8CD60 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q8CD60 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8CD60 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8CD60 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8CD60 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8CD60 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8CD60 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8CD60 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8CD60 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Q8CD60 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.55■□□□□ 0.4
Q8CD60 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8CD60 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8CD60 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Q8CD60 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8CD60 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8CD60 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Q8CD60 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8CD60 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Q8CD60 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8CD60 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.55■□□□□ 0.4
Q8CD60 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8CD60 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8CD60 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8CD60 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q8CD60 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Q8CD60 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q8CD60 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.54■□□□□ 0.4
Q8CD60 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Q8CD60 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q8CD60 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Q8CD60 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.54■□□□□ 0.4
Q8CD60 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.54■□□□□ 0.4
Q8CD60 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Q8CD60 Gm18101-201ENSMUST00000215769 548 ntBASIC17.54■□□□□ 0.4
Q8CD60 Gm21559-201ENSMUST00000220638 855 ntBASIC17.54■□□□□ 0.4
Q8CD60 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q8CD60 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q8CD60 Gm8587-201ENSMUST00000076538 843 ntBASIC17.54■□□□□ 0.4
Q8CD60 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Q8CD60 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.54■□□□□ 0.4
Q8CD60 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q8CD60 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q8CD60 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.54■□□□□ 0.4
Q8CD60 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q8CD60 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q8CD60 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8CD60 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Q8CD60 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8CD60 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8CD60 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8CD60 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8CD60 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8CD60 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Q8CD60 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8CD60 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms