Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.44■□□□□ 0.7
Shisa4Q8CA71 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Shisa4Q8CA71 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shisa4Q8CA71 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shisa4Q8CA71 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shisa4Q8CA71 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shisa4Q8CA71 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Shisa4Q8CA71 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Shisa4Q8CA71 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shisa4Q8CA71 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shisa4Q8CA71 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.43■□□□□ 0.7
Shisa4Q8CA71 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shisa4Q8CA71 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Shisa4Q8CA71 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Shisa4Q8CA71 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Shisa4Q8CA71 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shisa4Q8CA71 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shisa4Q8CA71 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.43■□□□□ 0.7
Shisa4Q8CA71 Gm44771-201ENSMUST00000206975 626 ntBASIC19.43■□□□□ 0.7
Shisa4Q8CA71 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.43■□□□□ 0.7
Shisa4Q8CA71 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Shisa4Q8CA71 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Shisa4Q8CA71 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Shisa4Q8CA71 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shisa4Q8CA71 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Shisa4Q8CA71 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shisa4Q8CA71 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shisa4Q8CA71 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shisa4Q8CA71 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shisa4Q8CA71 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shisa4Q8CA71 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shisa4Q8CA71 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shisa4Q8CA71 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.42■□□□□ 0.7
Shisa4Q8CA71 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shisa4Q8CA71 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shisa4Q8CA71 Gm15794-201ENSMUST00000120182 631 ntBASIC19.42■□□□□ 0.7
Shisa4Q8CA71 Gm6623-201ENSMUST00000173570 544 ntBASIC19.42■□□□□ 0.7
Shisa4Q8CA71 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Shisa4Q8CA71 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shisa4Q8CA71 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.42■□□□□ 0.7
Shisa4Q8CA71 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Shisa4Q8CA71 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shisa4Q8CA71 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shisa4Q8CA71 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shisa4Q8CA71 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Gm25016-201ENSMUST00000158399 131 ntBASIC19.41■□□□□ 0.7
Shisa4Q8CA71 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shisa4Q8CA71 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shisa4Q8CA71 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shisa4Q8CA71 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shisa4Q8CA71 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Shisa4Q8CA71 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shisa4Q8CA71 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shisa4Q8CA71 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shisa4Q8CA71 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shisa4Q8CA71 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Shisa4Q8CA71 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.4■□□□□ 0.7
Shisa4Q8CA71 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Shisa4Q8CA71 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Shisa4Q8CA71 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Shisa4Q8CA71 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Shisa4Q8CA71 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Shisa4Q8CA71 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Shisa4Q8CA71 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
Shisa4Q8CA71 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Shisa4Q8CA71 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shisa4Q8CA71 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shisa4Q8CA71 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shisa4Q8CA71 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.39■□□□□ 0.69
Shisa4Q8CA71 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.39■□□□□ 0.69
Shisa4Q8CA71 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shisa4Q8CA71 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shisa4Q8CA71 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Shisa4Q8CA71 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shisa4Q8CA71 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shisa4Q8CA71 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shisa4Q8CA71 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms